Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.35■□□□□ 0.53
Vsx1Q91V10 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vsx1Q91V10 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vsx1Q91V10 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vsx1Q91V10 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.34■□□□□ 0.53
Vsx1Q91V10 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.34■□□□□ 0.53
Vsx1Q91V10 Gm21362-201ENSMUST00000194272 928 ntBASIC18.34■□□□□ 0.53
Vsx1Q91V10 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.34■□□□□ 0.53
Vsx1Q91V10 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.34■□□□□ 0.53
Vsx1Q91V10 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.34■□□□□ 0.53
Vsx1Q91V10 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vsx1Q91V10 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vsx1Q91V10 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vsx1Q91V10 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vsx1Q91V10 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vsx1Q91V10 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vsx1Q91V10 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vsx1Q91V10 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vsx1Q91V10 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vsx1Q91V10 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vsx1Q91V10 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Vsx1Q91V10 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vsx1Q91V10 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vsx1Q91V10 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.33■□□□□ 0.53
Vsx1Q91V10 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vsx1Q91V10 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Vsx1Q91V10 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vsx1Q91V10 Gm5417-201ENSMUST00000079706 384 ntBASIC18.33■□□□□ 0.52
Vsx1Q91V10 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.33■□□□□ 0.52
Vsx1Q91V10 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.33■□□□□ 0.52
Vsx1Q91V10 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Vsx1Q91V10 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Vsx1Q91V10 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vsx1Q91V10 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vsx1Q91V10 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vsx1Q91V10 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Vsx1Q91V10 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vsx1Q91V10 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vsx1Q91V10 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vsx1Q91V10 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.32■□□□□ 0.52
Vsx1Q91V10 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.32■□□□□ 0.52
Vsx1Q91V10 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.32■□□□□ 0.52
Vsx1Q91V10 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.32■□□□□ 0.52
Vsx1Q91V10 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Vsx1Q91V10 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.32■□□□□ 0.52
Vsx1Q91V10 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vsx1Q91V10 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Gm13158-201ENSMUST00000122007 736 ntBASIC18.31■□□□□ 0.52
Vsx1Q91V10 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.31■□□□□ 0.52
Vsx1Q91V10 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.3■□□□□ 0.52
Vsx1Q91V10 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Vsx1Q91V10 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.3■□□□□ 0.52
Vsx1Q91V10 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vsx1Q91V10 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vsx1Q91V10 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vsx1Q91V10 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vsx1Q91V10 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vsx1Q91V10 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.3■□□□□ 0.52
Vsx1Q91V10 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vsx1Q91V10 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.29■□□□□ 0.52
Vsx1Q91V10 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vsx1Q91V10 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vsx1Q91V10 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.29■□□□□ 0.52
Vsx1Q91V10 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vsx1Q91V10 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Vsx1Q91V10 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vsx1Q91V10 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vsx1Q91V10 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vsx1Q91V10 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vsx1Q91V10 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Vsx1Q91V10 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vsx1Q91V10 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vsx1Q91V10 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms