Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
Usp33Q8R5K2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp33Q8R5K2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.33■■□□□ 1
Usp33Q8R5K2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.32■■□□□ 1
Usp33Q8R5K2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.32■■□□□ 1
Usp33Q8R5K2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp33Q8R5K2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp33Q8R5K2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Usp33Q8R5K2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.32■■□□□ 1
Usp33Q8R5K2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp33Q8R5K2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Usp33Q8R5K2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Usp33Q8R5K2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.32■■□□□ 1
Usp33Q8R5K2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
Usp33Q8R5K2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp33Q8R5K2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.31■■□□□ 1
Usp33Q8R5K2 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.31■■□□□ 1
Usp33Q8R5K2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp33Q8R5K2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Usp33Q8R5K2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp33Q8R5K2 Gm5417-201ENSMUST00000079706 384 ntBASIC21.31■■□□□ 1
Usp33Q8R5K2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp33Q8R5K2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp33Q8R5K2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.3■■□□□ 1
Usp33Q8R5K2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Usp33Q8R5K2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp33Q8R5K2 Gm11927-201ENSMUST00000118472 759 ntBASIC21.3■■□□□ 1
Usp33Q8R5K2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp33Q8R5K2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp33Q8R5K2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.3■■□□□ 1
Usp33Q8R5K2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp33Q8R5K2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp33Q8R5K2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp33Q8R5K2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp33Q8R5K2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Usp33Q8R5K2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Usp33Q8R5K2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.3■■□□□ 1
Usp33Q8R5K2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp33Q8R5K2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.29■■□□□ 1
Usp33Q8R5K2 Flg-201ENSMUST00000050758 1488 ntBASIC21.29■■□□□ 1
Usp33Q8R5K2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.29■■□□□ 1
Usp33Q8R5K2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.29■■□□□ 1
Usp33Q8R5K2 Mir5122-201ENSMUST00000175004 89 ntBASIC21.29■■□□□ 1
Usp33Q8R5K2 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.29■■□□□ 1
Usp33Q8R5K2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.29■■□□□ 1
Usp33Q8R5K2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.29■■□□□ 1
Usp33Q8R5K2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.29■■□□□ 1
Usp33Q8R5K2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Usp33Q8R5K2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Usp33Q8R5K2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp33Q8R5K2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Usp33Q8R5K2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.29■■□□□ 1
Usp33Q8R5K2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp33Q8R5K2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp33Q8R5K2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp33Q8R5K2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
Usp33Q8R5K2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp33Q8R5K2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp33Q8R5K2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp33Q8R5K2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.28■■□□□ 1
Usp33Q8R5K2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp33Q8R5K2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp33Q8R5K2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Usp33Q8R5K2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp33Q8R5K2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.28■■□□□ 1
Usp33Q8R5K2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp33Q8R5K2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp33Q8R5K2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.27■■□□□ 1
Usp33Q8R5K2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp33Q8R5K2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp33Q8R5K2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Usp33Q8R5K2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Usp33Q8R5K2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Usp33Q8R5K2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Usp33Q8R5K2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Usp33Q8R5K2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp33Q8R5K2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp33Q8R5K2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.26■□□□□ 0.99
Usp33Q8R5K2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.26■□□□□ 0.99
Usp33Q8R5K2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Usp33Q8R5K2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp33Q8R5K2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp33Q8R5K2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp33Q8R5K2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp33Q8R5K2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Usp33Q8R5K2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp33Q8R5K2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Usp33Q8R5K2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp33Q8R5K2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp33Q8R5K2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp33Q8R5K2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usp33Q8R5K2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.25■□□□□ 0.99
Usp33Q8R5K2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp33Q8R5K2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usp33Q8R5K2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp33Q8R5K2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp33Q8R5K2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp33Q8R5K2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp33Q8R5K2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp33Q8R5K2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms