Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna3Q8R4G9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.19■□□□□ 0.5
Chrna3Q8R4G9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Chrna3Q8R4G9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.19■□□□□ 0.5
Chrna3Q8R4G9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna3Q8R4G9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna3Q8R4G9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna3Q8R4G9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna3Q8R4G9 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.19■□□□□ 0.5
Chrna3Q8R4G9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna3Q8R4G9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna3Q8R4G9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna3Q8R4G9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chrna3Q8R4G9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chrna3Q8R4G9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chrna3Q8R4G9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chrna3Q8R4G9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Chrna3Q8R4G9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.16■□□□□ 0.5
Chrna3Q8R4G9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chrna3Q8R4G9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Chrna3Q8R4G9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Chrna3Q8R4G9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chrna3Q8R4G9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chrna3Q8R4G9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chrna3Q8R4G9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chrna3Q8R4G9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chrna3Q8R4G9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chrna3Q8R4G9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.15■□□□□ 0.5
Chrna3Q8R4G9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chrna3Q8R4G9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.15■□□□□ 0.5
Chrna3Q8R4G9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chrna3Q8R4G9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Chrna3Q8R4G9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chrna3Q8R4G9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chrna3Q8R4G9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chrna3Q8R4G9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chrna3Q8R4G9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
Chrna3Q8R4G9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.14■□□□□ 0.5
Chrna3Q8R4G9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chrna3Q8R4G9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chrna3Q8R4G9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Chrna3Q8R4G9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chrna3Q8R4G9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chrna3Q8R4G9 Gm26524-201ENSMUST00000192339 390 ntBASIC18.14■□□□□ 0.49
Chrna3Q8R4G9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chrna3Q8R4G9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.14■□□□□ 0.49
Chrna3Q8R4G9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chrna3Q8R4G9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chrna3Q8R4G9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chrna3Q8R4G9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.14■□□□□ 0.49
Chrna3Q8R4G9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chrna3Q8R4G9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chrna3Q8R4G9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chrna3Q8R4G9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chrna3Q8R4G9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Chrna3Q8R4G9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.13■□□□□ 0.49
Chrna3Q8R4G9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.13■□□□□ 0.49
Chrna3Q8R4G9 Rab3c-203ENSMUST00000224180 967 ntBASIC18.13■□□□□ 0.49
Chrna3Q8R4G9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chrna3Q8R4G9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chrna3Q8R4G9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chrna3Q8R4G9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chrna3Q8R4G9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chrna3Q8R4G9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chrna3Q8R4G9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chrna3Q8R4G9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chrna3Q8R4G9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chrna3Q8R4G9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chrna3Q8R4G9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chrna3Q8R4G9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Chrna3Q8R4G9 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms