Protein–RNA interactions for Protein: Q8R2I3

Defb35, Beta-defensin 35, mousemouse

Predictions only

Length 63 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb35Q8R2I3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Defb35Q8R2I3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Defb35Q8R2I3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.79■□□□□ 0.44
Defb35Q8R2I3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Defb35Q8R2I3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Defb35Q8R2I3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Defb35Q8R2I3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Defb35Q8R2I3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Defb35Q8R2I3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Defb35Q8R2I3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Defb35Q8R2I3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Defb35Q8R2I3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb35Q8R2I3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Defb35Q8R2I3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb35Q8R2I3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb35Q8R2I3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.78■□□□□ 0.44
Defb35Q8R2I3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb35Q8R2I3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb35Q8R2I3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.78■□□□□ 0.44
Defb35Q8R2I3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Defb35Q8R2I3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.78■□□□□ 0.44
Defb35Q8R2I3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Defb35Q8R2I3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Defb35Q8R2I3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Defb35Q8R2I3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Defb35Q8R2I3 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.77■□□□□ 0.44
Defb35Q8R2I3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Defb35Q8R2I3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Defb35Q8R2I3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Defb35Q8R2I3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Defb35Q8R2I3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.77■□□□□ 0.44
Defb35Q8R2I3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Defb35Q8R2I3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Defb35Q8R2I3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Defb35Q8R2I3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Defb35Q8R2I3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Defb35Q8R2I3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Defb35Q8R2I3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.77■□□□□ 0.43
Defb35Q8R2I3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Defb35Q8R2I3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Defb35Q8R2I3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Defb35Q8R2I3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.75■□□□□ 0.43
Defb35Q8R2I3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Defb35Q8R2I3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Defb35Q8R2I3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Defb35Q8R2I3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Defb35Q8R2I3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Defb35Q8R2I3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Defb35Q8R2I3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Defb35Q8R2I3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Defb35Q8R2I3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Defb35Q8R2I3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Defb35Q8R2I3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Defb35Q8R2I3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Defb35Q8R2I3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Defb35Q8R2I3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Defb35Q8R2I3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Defb35Q8R2I3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Defb35Q8R2I3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Defb35Q8R2I3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Defb35Q8R2I3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Defb35Q8R2I3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Defb35Q8R2I3 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.73■□□□□ 0.43
Defb35Q8R2I3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Defb35Q8R2I3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Defb35Q8R2I3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Defb35Q8R2I3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.73■□□□□ 0.43
Defb35Q8R2I3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Defb35Q8R2I3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Defb35Q8R2I3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Defb35Q8R2I3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Defb35Q8R2I3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Defb35Q8R2I3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Defb35Q8R2I3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Defb35Q8R2I3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Defb35Q8R2I3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Defb35Q8R2I3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.72■□□□□ 0.43
Defb35Q8R2I3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.72■□□□□ 0.43
Defb35Q8R2I3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Defb35Q8R2I3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Defb35Q8R2I3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Defb35Q8R2I3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Defb35Q8R2I3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms