Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chmp7Q8R1T1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chmp7Q8R1T1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chmp7Q8R1T1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chmp7Q8R1T1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Chmp7Q8R1T1 Gm13836-201ENSMUST00000121159 501 ntBASIC23.78■■□□□ 1.4
Chmp7Q8R1T1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
Chmp7Q8R1T1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC23.78■■□□□ 1.4
Chmp7Q8R1T1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chmp7Q8R1T1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC23.78■■□□□ 1.4
Chmp7Q8R1T1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chmp7Q8R1T1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Chmp7Q8R1T1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chmp7Q8R1T1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Chmp7Q8R1T1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chmp7Q8R1T1 Gm8309-201ENSMUST00000206627 1448 ntBASIC23.77■■□□□ 1.4
Chmp7Q8R1T1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC23.77■■□□□ 1.4
Chmp7Q8R1T1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Chmp7Q8R1T1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chmp7Q8R1T1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chmp7Q8R1T1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chmp7Q8R1T1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chmp7Q8R1T1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC23.76■■□□□ 1.39
Chmp7Q8R1T1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Chmp7Q8R1T1 Gm37055-201ENSMUST00000191866 133 ntBASIC23.76■■□□□ 1.39
Chmp7Q8R1T1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC23.76■■□□□ 1.39
Chmp7Q8R1T1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Chmp7Q8R1T1 AC135963.1-201ENSMUST00000211640 717 ntBASIC23.76■■□□□ 1.39
Chmp7Q8R1T1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chmp7Q8R1T1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chmp7Q8R1T1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chmp7Q8R1T1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chmp7Q8R1T1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chmp7Q8R1T1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Chmp7Q8R1T1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Chmp7Q8R1T1 Gm7977-201ENSMUST00000193787 748 ntBASIC23.75■■□□□ 1.39
Chmp7Q8R1T1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chmp7Q8R1T1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Chmp7Q8R1T1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC23.75■■□□□ 1.39
Chmp7Q8R1T1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chmp7Q8R1T1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Chmp7Q8R1T1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Chmp7Q8R1T1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chmp7Q8R1T1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chmp7Q8R1T1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chmp7Q8R1T1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Chmp7Q8R1T1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chmp7Q8R1T1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Chmp7Q8R1T1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Chmp7Q8R1T1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chmp7Q8R1T1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Chmp7Q8R1T1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Chmp7Q8R1T1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chmp7Q8R1T1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chmp7Q8R1T1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chmp7Q8R1T1 Golph3-202ENSMUST00000226517 2359 ntBASIC23.73■■□□□ 1.39
Chmp7Q8R1T1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Chmp7Q8R1T1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chmp7Q8R1T1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chmp7Q8R1T1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chmp7Q8R1T1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chmp7Q8R1T1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC23.72■■□□□ 1.39
Chmp7Q8R1T1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Chmp7Q8R1T1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Chmp7Q8R1T1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chmp7Q8R1T1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC23.72■■□□□ 1.39
Chmp7Q8R1T1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC23.72■■□□□ 1.39
Chmp7Q8R1T1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
Chmp7Q8R1T1 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.72■■□□□ 1.39
Chmp7Q8R1T1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chmp7Q8R1T1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chmp7Q8R1T1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chmp7Q8R1T1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chmp7Q8R1T1 Gm15565-201ENSMUST00000118890 427 ntBASIC23.71■■□□□ 1.39
Chmp7Q8R1T1 Gm9484-201ENSMUST00000195892 1159 ntBASIC23.71■■□□□ 1.39
Chmp7Q8R1T1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Chmp7Q8R1T1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chmp7Q8R1T1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chmp7Q8R1T1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Chmp7Q8R1T1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chmp7Q8R1T1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Chmp7Q8R1T1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC23.7■■□□□ 1.38
Chmp7Q8R1T1 AC124603.1-201ENSMUST00000223843 308 ntBASIC23.7■■□□□ 1.38
Chmp7Q8R1T1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chmp7Q8R1T1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chmp7Q8R1T1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chmp7Q8R1T1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chmp7Q8R1T1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chmp7Q8R1T1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Chmp7Q8R1T1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Chmp7Q8R1T1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms