Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CipcQ8R0W1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CipcQ8R0W1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CipcQ8R0W1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CipcQ8R0W1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CipcQ8R0W1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CipcQ8R0W1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CipcQ8R0W1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CipcQ8R0W1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CipcQ8R0W1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CipcQ8R0W1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CipcQ8R0W1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CipcQ8R0W1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CipcQ8R0W1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.47■□□□□ 0.39
CipcQ8R0W1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CipcQ8R0W1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CipcQ8R0W1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CipcQ8R0W1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CipcQ8R0W1 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.47■□□□□ 0.39
CipcQ8R0W1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CipcQ8R0W1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CipcQ8R0W1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CipcQ8R0W1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CipcQ8R0W1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CipcQ8R0W1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CipcQ8R0W1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.46■□□□□ 0.39
CipcQ8R0W1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CipcQ8R0W1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CipcQ8R0W1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CipcQ8R0W1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CipcQ8R0W1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CipcQ8R0W1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CipcQ8R0W1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CipcQ8R0W1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CipcQ8R0W1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CipcQ8R0W1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CipcQ8R0W1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CipcQ8R0W1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.45■□□□□ 0.38
CipcQ8R0W1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CipcQ8R0W1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.45■□□□□ 0.38
CipcQ8R0W1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CipcQ8R0W1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CipcQ8R0W1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CipcQ8R0W1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CipcQ8R0W1 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.45■□□□□ 0.38
CipcQ8R0W1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CipcQ8R0W1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CipcQ8R0W1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CipcQ8R0W1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CipcQ8R0W1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CipcQ8R0W1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CipcQ8R0W1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CipcQ8R0W1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CipcQ8R0W1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.44■□□□□ 0.38
CipcQ8R0W1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CipcQ8R0W1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CipcQ8R0W1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CipcQ8R0W1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.44■□□□□ 0.38
CipcQ8R0W1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.44■□□□□ 0.38
CipcQ8R0W1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CipcQ8R0W1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CipcQ8R0W1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CipcQ8R0W1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CipcQ8R0W1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
CipcQ8R0W1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CipcQ8R0W1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CipcQ8R0W1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CipcQ8R0W1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CipcQ8R0W1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CipcQ8R0W1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.43■□□□□ 0.38
CipcQ8R0W1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
CipcQ8R0W1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.43■□□□□ 0.38
CipcQ8R0W1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.43■□□□□ 0.38
CipcQ8R0W1 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.43■□□□□ 0.38
CipcQ8R0W1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CipcQ8R0W1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CipcQ8R0W1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CipcQ8R0W1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CipcQ8R0W1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CipcQ8R0W1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CipcQ8R0W1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CipcQ8R0W1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CipcQ8R0W1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CipcQ8R0W1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CipcQ8R0W1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CipcQ8R0W1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CipcQ8R0W1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CipcQ8R0W1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CipcQ8R0W1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.42■□□□□ 0.38
CipcQ8R0W1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CipcQ8R0W1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.42■□□□□ 0.38
CipcQ8R0W1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CipcQ8R0W1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CipcQ8R0W1 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.42■□□□□ 0.38
CipcQ8R0W1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.42■□□□□ 0.38
CipcQ8R0W1 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.42■□□□□ 0.38
CipcQ8R0W1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CipcQ8R0W1 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.42■□□□□ 0.38
CipcQ8R0W1 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.42■□□□□ 0.38
CipcQ8R0W1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms