Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sf3a1Q8K4Z5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sf3a1Q8K4Z5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sf3a1Q8K4Z5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC22.66■■□□□ 1.22
Sf3a1Q8K4Z5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sf3a1Q8K4Z5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sf3a1Q8K4Z5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sf3a1Q8K4Z5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sf3a1Q8K4Z5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sf3a1Q8K4Z5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
Sf3a1Q8K4Z5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sf3a1Q8K4Z5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sf3a1Q8K4Z5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sf3a1Q8K4Z5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sf3a1Q8K4Z5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Sf3a1Q8K4Z5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sf3a1Q8K4Z5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Sf3a1Q8K4Z5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sf3a1Q8K4Z5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sf3a1Q8K4Z5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sf3a1Q8K4Z5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Sf3a1Q8K4Z5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sf3a1Q8K4Z5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.64■■□□□ 1.22
Sf3a1Q8K4Z5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC22.64■■□□□ 1.22
Sf3a1Q8K4Z5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sf3a1Q8K4Z5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sf3a1Q8K4Z5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sf3a1Q8K4Z5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
Sf3a1Q8K4Z5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sf3a1Q8K4Z5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Sf3a1Q8K4Z5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sf3a1Q8K4Z5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sf3a1Q8K4Z5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Sf3a1Q8K4Z5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sf3a1Q8K4Z5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sf3a1Q8K4Z5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sf3a1Q8K4Z5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sf3a1Q8K4Z5 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.63■■□□□ 1.21
Sf3a1Q8K4Z5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC22.63■■□□□ 1.21
Sf3a1Q8K4Z5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sf3a1Q8K4Z5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Sf3a1Q8K4Z5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sf3a1Q8K4Z5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Mir5133-201ENSMUST00000174955 77 ntBASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sf3a1Q8K4Z5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sf3a1Q8K4Z5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Sf3a1Q8K4Z5 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.61■■□□□ 1.21
Sf3a1Q8K4Z5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sf3a1Q8K4Z5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC22.61■■□□□ 1.21
Sf3a1Q8K4Z5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC22.61■■□□□ 1.21
Sf3a1Q8K4Z5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sf3a1Q8K4Z5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sf3a1Q8K4Z5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sf3a1Q8K4Z5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Sf3a1Q8K4Z5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Sf3a1Q8K4Z5 Gm13148-201ENSMUST00000118892 745 ntBASIC22.6■■□□□ 1.21
Sf3a1Q8K4Z5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Sf3a1Q8K4Z5 Gm6211-202ENSMUST00000167849 925 ntBASIC22.6■■□□□ 1.21
Sf3a1Q8K4Z5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sf3a1Q8K4Z5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sf3a1Q8K4Z5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sf3a1Q8K4Z5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sf3a1Q8K4Z5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sf3a1Q8K4Z5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sf3a1Q8K4Z5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
Sf3a1Q8K4Z5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sf3a1Q8K4Z5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sf3a1Q8K4Z5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC22.59■■□□□ 1.21
Sf3a1Q8K4Z5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sf3a1Q8K4Z5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sf3a1Q8K4Z5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sf3a1Q8K4Z5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sf3a1Q8K4Z5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sf3a1Q8K4Z5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Sf3a1Q8K4Z5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sf3a1Q8K4Z5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sf3a1Q8K4Z5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Sf3a1Q8K4Z5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
Sf3a1Q8K4Z5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms