Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col23a1Q8K4G2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col23a1Q8K4G2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col23a1Q8K4G2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col23a1Q8K4G2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Col23a1Q8K4G2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Col23a1Q8K4G2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 Gm38285-201ENSMUST00000192928 922 ntBASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col23a1Q8K4G2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Col23a1Q8K4G2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Col23a1Q8K4G2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.71■■□□□ 1.23
Col23a1Q8K4G2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Col23a1Q8K4G2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col23a1Q8K4G2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col23a1Q8K4G2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Col23a1Q8K4G2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col23a1Q8K4G2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.71■■□□□ 1.23
Col23a1Q8K4G2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col23a1Q8K4G2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Col23a1Q8K4G2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col23a1Q8K4G2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col23a1Q8K4G2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col23a1Q8K4G2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC22.7■■□□□ 1.22
Col23a1Q8K4G2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col23a1Q8K4G2 AC166341.7-201ENSMUST00000221698 126 ntBASIC22.7■■□□□ 1.22
Col23a1Q8K4G2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col23a1Q8K4G2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col23a1Q8K4G2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Col23a1Q8K4G2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Col23a1Q8K4G2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col23a1Q8K4G2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC22.69■■□□□ 1.22
Col23a1Q8K4G2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC22.69■■□□□ 1.22
Col23a1Q8K4G2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col23a1Q8K4G2 Gm8309-201ENSMUST00000206627 1448 ntBASIC22.69■■□□□ 1.22
Col23a1Q8K4G2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col23a1Q8K4G2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC22.69■■□□□ 1.22
Col23a1Q8K4G2 Mir5130-201ENSMUST00000175160 84 ntBASIC22.69■■□□□ 1.22
Col23a1Q8K4G2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col23a1Q8K4G2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Col23a1Q8K4G2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.69■■□□□ 1.22
Col23a1Q8K4G2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col23a1Q8K4G2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col23a1Q8K4G2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col23a1Q8K4G2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col23a1Q8K4G2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col23a1Q8K4G2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC22.68■■□□□ 1.22
Col23a1Q8K4G2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC22.68■■□□□ 1.22
Col23a1Q8K4G2 Gm7461-201ENSMUST00000058918 827 ntBASIC22.68■■□□□ 1.22
Col23a1Q8K4G2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col23a1Q8K4G2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col23a1Q8K4G2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.67■■□□□ 1.22
Col23a1Q8K4G2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col23a1Q8K4G2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Col23a1Q8K4G2 Gm7284-201ENSMUST00000131667 944 ntBASIC22.67■■□□□ 1.22
Col23a1Q8K4G2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col23a1Q8K4G2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.67■■□□□ 1.22
Col23a1Q8K4G2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col23a1Q8K4G2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col23a1Q8K4G2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Col23a1Q8K4G2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Col23a1Q8K4G2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22.66■■□□□ 1.22
Col23a1Q8K4G2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col23a1Q8K4G2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Col23a1Q8K4G2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col23a1Q8K4G2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC22.66■■□□□ 1.22
Col23a1Q8K4G2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col23a1Q8K4G2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Col23a1Q8K4G2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC22.66■■□□□ 1.22
Col23a1Q8K4G2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Col23a1Q8K4G2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col23a1Q8K4G2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.65■■□□□ 1.22
Col23a1Q8K4G2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col23a1Q8K4G2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC22.65■■□□□ 1.22
Col23a1Q8K4G2 Gm17661-201ENSMUST00000170317 270 ntBASIC22.65■■□□□ 1.22
Col23a1Q8K4G2 Mir6349-201ENSMUST00000184059 97 ntBASIC22.65■■□□□ 1.22
Col23a1Q8K4G2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col23a1Q8K4G2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col23a1Q8K4G2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col23a1Q8K4G2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Col23a1Q8K4G2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Col23a1Q8K4G2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.21
Col23a1Q8K4G2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Col23a1Q8K4G2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Col23a1Q8K4G2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC22.64■■□□□ 1.21
Col23a1Q8K4G2 Gm27463-201ENSMUST00000183569 57 ntBASIC22.64■■□□□ 1.21
Col23a1Q8K4G2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC22.64■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms