Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm26571-201ENSMUST00000181399 666 ntBASIC17.51■□□□□ 0.39
Clrn1Q8K445 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.5■□□□□ 0.39
Clrn1Q8K445 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Gm42569-201ENSMUST00000200539 472 ntBASIC17.5■□□□□ 0.39
Clrn1Q8K445 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Clrn1Q8K445 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Clrn1Q8K445 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn1Q8K445 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn1Q8K445 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn1Q8K445 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn1Q8K445 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Clrn1Q8K445 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn1Q8K445 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn1Q8K445 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.49■□□□□ 0.39
Clrn1Q8K445 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn1Q8K445 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn1Q8K445 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Clrn1Q8K445 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn1Q8K445 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Clrn1Q8K445 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.48■□□□□ 0.39
Clrn1Q8K445 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn1Q8K445 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn1Q8K445 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn1Q8K445 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn1Q8K445 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Clrn1Q8K445 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn1Q8K445 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn1Q8K445 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn1Q8K445 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn1Q8K445 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn1Q8K445 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn1Q8K445 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn1Q8K445 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn1Q8K445 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.47■□□□□ 0.39
Clrn1Q8K445 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn1Q8K445 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn1Q8K445 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Clrn1Q8K445 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.46■□□□□ 0.39
Clrn1Q8K445 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Nespas-201ENSMUST00000143738 1083 ntBASIC17.46■□□□□ 0.39
Clrn1Q8K445 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Gm6420-201ENSMUST00000193885 723 ntBASIC17.46■□□□□ 0.39
Clrn1Q8K445 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Clrn1Q8K445 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Clrn1Q8K445 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Clrn1Q8K445 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn1Q8K445 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn1Q8K445 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms