Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin28aQ8K3Y3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.3■□□□□ 0.36
Lin28aQ8K3Y3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Lin28aQ8K3Y3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.3■□□□□ 0.36
Lin28aQ8K3Y3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lin28aQ8K3Y3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin28aQ8K3Y3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lin28aQ8K3Y3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin28aQ8K3Y3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.3■□□□□ 0.36
Lin28aQ8K3Y3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin28aQ8K3Y3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin28aQ8K3Y3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lin28aQ8K3Y3 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.29■□□□□ 0.36
Lin28aQ8K3Y3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin28aQ8K3Y3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin28aQ8K3Y3 Gm10653-202ENSMUST00000139570 835 ntBASIC17.29■□□□□ 0.36
Lin28aQ8K3Y3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.29■□□□□ 0.36
Lin28aQ8K3Y3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lin28aQ8K3Y3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin28aQ8K3Y3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin28aQ8K3Y3 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.29■□□□□ 0.36
Lin28aQ8K3Y3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin28aQ8K3Y3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin28aQ8K3Y3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin28aQ8K3Y3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin28aQ8K3Y3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Lin28aQ8K3Y3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28aQ8K3Y3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28aQ8K3Y3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28aQ8K3Y3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28aQ8K3Y3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Lin28aQ8K3Y3 Gm12527-201ENSMUST00000117967 564 ntBASIC17.27■□□□□ 0.36
Lin28aQ8K3Y3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.27■□□□□ 0.36
Lin28aQ8K3Y3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28aQ8K3Y3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.27■□□□□ 0.36
Lin28aQ8K3Y3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28aQ8K3Y3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28aQ8K3Y3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lin28aQ8K3Y3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lin28aQ8K3Y3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.27■□□□□ 0.35
Lin28aQ8K3Y3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Lin28aQ8K3Y3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
Lin28aQ8K3Y3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lin28aQ8K3Y3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Gm26524-201ENSMUST00000192339 390 ntBASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lin28aQ8K3Y3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28aQ8K3Y3 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.25■□□□□ 0.35
Lin28aQ8K3Y3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28aQ8K3Y3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28aQ8K3Y3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28aQ8K3Y3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.25■□□□□ 0.35
Lin28aQ8K3Y3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.25■□□□□ 0.35
Lin28aQ8K3Y3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28aQ8K3Y3 Rab3c-203ENSMUST00000224180 967 ntBASIC17.25■□□□□ 0.35
Lin28aQ8K3Y3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28aQ8K3Y3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28aQ8K3Y3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lin28aQ8K3Y3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lin28aQ8K3Y3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lin28aQ8K3Y3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28aQ8K3Y3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.24■□□□□ 0.35
Lin28aQ8K3Y3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28aQ8K3Y3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin28aQ8K3Y3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.24■□□□□ 0.35
Lin28aQ8K3Y3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms