Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn1Q8K0T0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn1Q8K0T0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn1Q8K0T0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn1Q8K0T0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn1Q8K0T0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn1Q8K0T0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn1Q8K0T0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn1Q8K0T0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn1Q8K0T0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn1Q8K0T0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn1Q8K0T0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn1Q8K0T0 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.4■■□□□ 1.02
Rtn1Q8K0T0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn1Q8K0T0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Rtn1Q8K0T0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn1Q8K0T0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn1Q8K0T0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn1Q8K0T0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn1Q8K0T0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn1Q8K0T0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn1Q8K0T0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn1Q8K0T0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rtn1Q8K0T0 Gm6365-201ENSMUST00000054711 744 ntBASIC21.39■■□□□ 1.01
Rtn1Q8K0T0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rtn1Q8K0T0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rtn1Q8K0T0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rtn1Q8K0T0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.39■■□□□ 1.01
Rtn1Q8K0T0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rtn1Q8K0T0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn1Q8K0T0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn1Q8K0T0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn1Q8K0T0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn1Q8K0T0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn1Q8K0T0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn1Q8K0T0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn1Q8K0T0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Rtn1Q8K0T0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn1Q8K0T0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn1Q8K0T0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.37■■□□□ 1.01
Rtn1Q8K0T0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn1Q8K0T0 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.37■■□□□ 1.01
Rtn1Q8K0T0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn1Q8K0T0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn1Q8K0T0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Rtn1Q8K0T0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rtn1Q8K0T0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.36■■□□□ 1.01
Rtn1Q8K0T0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rtn1Q8K0T0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rtn1Q8K0T0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rtn1Q8K0T0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rtn1Q8K0T0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.36■■□□□ 1.01
Rtn1Q8K0T0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rtn1Q8K0T0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rtn1Q8K0T0 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.36■■□□□ 1.01
Rtn1Q8K0T0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rtn1Q8K0T0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rtn1Q8K0T0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Rtn1Q8K0T0 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.35■■□□□ 1.01
Rtn1Q8K0T0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rtn1Q8K0T0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.35■■□□□ 1.01
Rtn1Q8K0T0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.35■■□□□ 1.01
Rtn1Q8K0T0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.35■■□□□ 1.01
Rtn1Q8K0T0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Rtn1Q8K0T0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rtn1Q8K0T0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.34■■□□□ 1.01
Rtn1Q8K0T0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtn1Q8K0T0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.34■■□□□ 1.01
Rtn1Q8K0T0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Rtn1Q8K0T0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtn1Q8K0T0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtn1Q8K0T0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtn1Q8K0T0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Rtn1Q8K0T0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn1Q8K0T0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn1Q8K0T0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rtn1Q8K0T0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.33■■□□□ 1.01
Rtn1Q8K0T0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.33■■□□□ 1.01
Rtn1Q8K0T0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.33■■□□□ 1.01
Rtn1Q8K0T0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rtn1Q8K0T0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rtn1Q8K0T0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Rtn1Q8K0T0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rtn1Q8K0T0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms