Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.84■□□□□ 0.61
CopaQ8CIE6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CopaQ8CIE6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CopaQ8CIE6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CopaQ8CIE6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.84■□□□□ 0.61
CopaQ8CIE6 Mir5133-201ENSMUST00000174955 77 ntBASIC18.84■□□□□ 0.61
CopaQ8CIE6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.84■□□□□ 0.61
CopaQ8CIE6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CopaQ8CIE6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
CopaQ8CIE6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CopaQ8CIE6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CopaQ8CIE6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CopaQ8CIE6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CopaQ8CIE6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CopaQ8CIE6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CopaQ8CIE6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CopaQ8CIE6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CopaQ8CIE6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CopaQ8CIE6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.83■□□□□ 0.6
CopaQ8CIE6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CopaQ8CIE6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.82■□□□□ 0.6
CopaQ8CIE6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Gm13534-201ENSMUST00000121169 513 ntBASIC18.82■□□□□ 0.6
CopaQ8CIE6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopaQ8CIE6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.82■□□□□ 0.6
CopaQ8CIE6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CopaQ8CIE6 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.82■□□□□ 0.6
CopaQ8CIE6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopaQ8CIE6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CopaQ8CIE6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopaQ8CIE6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CopaQ8CIE6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopaQ8CIE6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CopaQ8CIE6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopaQ8CIE6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CopaQ8CIE6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopaQ8CIE6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.81■□□□□ 0.6
CopaQ8CIE6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopaQ8CIE6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopaQ8CIE6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.81■□□□□ 0.6
CopaQ8CIE6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CopaQ8CIE6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CopaQ8CIE6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CopaQ8CIE6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopaQ8CIE6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopaQ8CIE6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CopaQ8CIE6 Gm6420-201ENSMUST00000193885 723 ntBASIC18.8■□□□□ 0.6
CopaQ8CIE6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.8■□□□□ 0.6
CopaQ8CIE6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopaQ8CIE6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopaQ8CIE6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopaQ8CIE6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CopaQ8CIE6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CopaQ8CIE6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CopaQ8CIE6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.8■□□□□ 0.6
CopaQ8CIE6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CopaQ8CIE6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CopaQ8CIE6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopaQ8CIE6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CopaQ8CIE6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopaQ8CIE6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.79■□□□□ 0.6
CopaQ8CIE6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopaQ8CIE6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CopaQ8CIE6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopaQ8CIE6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CopaQ8CIE6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopaQ8CIE6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopaQ8CIE6 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.79■□□□□ 0.6
CopaQ8CIE6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopaQ8CIE6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CopaQ8CIE6 Rarb-207ENSMUST00000225921 2756 ntBASIC18.79■□□□□ 0.6
CopaQ8CIE6 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.79■□□□□ 0.6
CopaQ8CIE6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CopaQ8CIE6 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.78■□□□□ 0.6
CopaQ8CIE6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopaQ8CIE6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
CopaQ8CIE6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.78■□□□□ 0.6
CopaQ8CIE6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CopaQ8CIE6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopaQ8CIE6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopaQ8CIE6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopaQ8CIE6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopaQ8CIE6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.78■□□□□ 0.6
CopaQ8CIE6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CopaQ8CIE6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CopaQ8CIE6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CopaQ8CIE6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms