Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Calcoco1Q8CGU1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Calcoco1Q8CGU1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Calcoco1Q8CGU1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Calcoco1Q8CGU1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Calcoco1Q8CGU1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Calcoco1Q8CGU1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Calcoco1Q8CGU1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.25■□□□□ 0.67
Calcoco1Q8CGU1 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.25■□□□□ 0.67
Calcoco1Q8CGU1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Calcoco1Q8CGU1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Calcoco1Q8CGU1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.25■□□□□ 0.67
Calcoco1Q8CGU1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Calcoco1Q8CGU1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Calcoco1Q8CGU1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Calcoco1Q8CGU1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Calcoco1Q8CGU1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calcoco1Q8CGU1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.23■□□□□ 0.67
Calcoco1Q8CGU1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Calcoco1Q8CGU1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Calcoco1Q8CGU1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.23■□□□□ 0.67
Calcoco1Q8CGU1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calcoco1Q8CGU1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Calcoco1Q8CGU1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calcoco1Q8CGU1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calcoco1Q8CGU1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calcoco1Q8CGU1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Calcoco1Q8CGU1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.23■□□□□ 0.67
Calcoco1Q8CGU1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Calcoco1Q8CGU1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Calcoco1Q8CGU1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms