Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd4Q8CC84 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd4Q8CC84 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd4Q8CC84 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Lysmd4Q8CC84 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Lysmd4Q8CC84 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lysmd4Q8CC84 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lysmd4Q8CC84 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd4Q8CC84 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd4Q8CC84 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Lysmd4Q8CC84 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd4Q8CC84 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd4Q8CC84 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd4Q8CC84 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Lysmd4Q8CC84 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Lysmd4Q8CC84 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd4Q8CC84 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.58■□□□□ 0.24
Lysmd4Q8CC84 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Lysmd4Q8CC84 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Lysmd4Q8CC84 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd4Q8CC84 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Lysmd4Q8CC84 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd4Q8CC84 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd4Q8CC84 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd4Q8CC84 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd4Q8CC84 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Lysmd4Q8CC84 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd4Q8CC84 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd4Q8CC84 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Lysmd4Q8CC84 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd4Q8CC84 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lysmd4Q8CC84 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lysmd4Q8CC84 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.56■□□□□ 0.24
Lysmd4Q8CC84 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lysmd4Q8CC84 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lysmd4Q8CC84 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lysmd4Q8CC84 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lysmd4Q8CC84 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lysmd4Q8CC84 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lysmd4Q8CC84 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms