Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpc5Q8C7D3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpc5Q8C7D3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.53■□□□□ 0.56
Pabpc5Q8C7D3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpc5Q8C7D3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpc5Q8C7D3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpc5Q8C7D3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpc5Q8C7D3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpc5Q8C7D3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpc5Q8C7D3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpc5Q8C7D3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pabpc5Q8C7D3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pabpc5Q8C7D3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pabpc5Q8C7D3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pabpc5Q8C7D3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Pabpc5Q8C7D3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pabpc5Q8C7D3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pabpc5Q8C7D3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pabpc5Q8C7D3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pabpc5Q8C7D3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pabpc5Q8C7D3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Pabpc5Q8C7D3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.5■□□□□ 0.55
Pabpc5Q8C7D3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pabpc5Q8C7D3 Mir7071-201ENSMUST00000184847 69 ntBASIC18.5■□□□□ 0.55
Pabpc5Q8C7D3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pabpc5Q8C7D3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pabpc5Q8C7D3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pabpc5Q8C7D3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pabpc5Q8C7D3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pabpc5Q8C7D3 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Gm7290-201ENSMUST00000104990 617 ntBASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Gm12527-201ENSMUST00000117967 564 ntBASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Gm12918-201ENSMUST00000120234 636 ntBASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Gm15710-201ENSMUST00000121821 636 ntBASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Gm5075-201ENSMUST00000196916 622 ntBASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Gm6365-201ENSMUST00000054711 744 ntBASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pabpc5Q8C7D3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pabpc5Q8C7D3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms