Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.62■□□□□ 0.41
Eri3Q8C460 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eri3Q8C460 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Eri3Q8C460 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.62■□□□□ 0.41
Eri3Q8C460 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Eri3Q8C460 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eri3Q8C460 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Eri3Q8C460 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Eri3Q8C460 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eri3Q8C460 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eri3Q8C460 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Eri3Q8C460 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eri3Q8C460 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eri3Q8C460 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Eri3Q8C460 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eri3Q8C460 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eri3Q8C460 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eri3Q8C460 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Eri3Q8C460 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.61■□□□□ 0.41
Eri3Q8C460 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Eri3Q8C460 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Eri3Q8C460 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Eri3Q8C460 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Eri3Q8C460 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Eri3Q8C460 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Eri3Q8C460 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Eri3Q8C460 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Eri3Q8C460 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Eri3Q8C460 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Eri3Q8C460 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Eri3Q8C460 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Eri3Q8C460 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Eri3Q8C460 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Eri3Q8C460 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Eri3Q8C460 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.61■□□□□ 0.41
Eri3Q8C460 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Eri3Q8C460 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Eri3Q8C460 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Eri3Q8C460 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Eri3Q8C460 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Eri3Q8C460 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Eri3Q8C460 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.6■□□□□ 0.41
Eri3Q8C460 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Eri3Q8C460 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Eri3Q8C460 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.6■□□□□ 0.41
Eri3Q8C460 Gm7291-201ENSMUST00000199147 382 ntBASIC17.6■□□□□ 0.41
Eri3Q8C460 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Eri3Q8C460 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Eri3Q8C460 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.6■□□□□ 0.41
Eri3Q8C460 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Eri3Q8C460 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Eri3Q8C460 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Eri3Q8C460 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.6■□□□□ 0.41
Eri3Q8C460 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Eri3Q8C460 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Eri3Q8C460 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Eri3Q8C460 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Eri3Q8C460 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Eri3Q8C460 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Eri3Q8C460 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Eri3Q8C460 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Eri3Q8C460 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Eri3Q8C460 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Eri3Q8C460 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Eri3Q8C460 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Eri3Q8C460 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.59■□□□□ 0.41
Eri3Q8C460 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Eri3Q8C460 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Eri3Q8C460 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Eri3Q8C460 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Eri3Q8C460 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Eri3Q8C460 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Eri3Q8C460 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Eri3Q8C460 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Eri3Q8C460 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Eri3Q8C460 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Eri3Q8C460 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.58■□□□□ 0.4
Eri3Q8C460 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.58■□□□□ 0.4
Eri3Q8C460 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.58■□□□□ 0.4
Eri3Q8C460 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Eri3Q8C460 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Eri3Q8C460 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.58■□□□□ 0.4
Eri3Q8C460 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Eri3Q8C460 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Eri3Q8C460 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.58■□□□□ 0.4
Eri3Q8C460 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Eri3Q8C460 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Eri3Q8C460 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Eri3Q8C460 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Eri3Q8C460 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Eri3Q8C460 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.57■□□□□ 0.4
Eri3Q8C460 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Eri3Q8C460 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Eri3Q8C460 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Eri3Q8C460 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.57■□□□□ 0.4
Eri3Q8C460 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Eri3Q8C460 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Eri3Q8C460 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Eri3Q8C460 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.57■□□□□ 0.4
Eri3Q8C460 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms