Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim35Q8C006 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim35Q8C006 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim35Q8C006 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim35Q8C006 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trim35Q8C006 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim35Q8C006 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim35Q8C006 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim35Q8C006 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim35Q8C006 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.91■□□□□ 0.62
Trim35Q8C006 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.91■□□□□ 0.62
Trim35Q8C006 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.91■□□□□ 0.62
Trim35Q8C006 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim35Q8C006 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim35Q8C006 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim35Q8C006 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim35Q8C006 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim35Q8C006 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim35Q8C006 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim35Q8C006 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim35Q8C006 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim35Q8C006 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim35Q8C006 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trim35Q8C006 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim35Q8C006 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim35Q8C006 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.9■□□□□ 0.62
Trim35Q8C006 Gm27801-201ENSMUST00000184174 223 ntBASIC18.9■□□□□ 0.62
Trim35Q8C006 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.9■□□□□ 0.62
Trim35Q8C006 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trim35Q8C006 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim35Q8C006 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim35Q8C006 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim35Q8C006 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim35Q8C006 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim35Q8C006 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim35Q8C006 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Trim35Q8C006 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Trim35Q8C006 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim35Q8C006 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim35Q8C006 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim35Q8C006 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim35Q8C006 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.89■□□□□ 0.61
Trim35Q8C006 Gm37866-201ENSMUST00000191950 696 ntBASIC18.89■□□□□ 0.61
Trim35Q8C006 Gm43222-201ENSMUST00000199013 603 ntBASIC18.89■□□□□ 0.61
Trim35Q8C006 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC18.89■□□□□ 0.61
Trim35Q8C006 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
Trim35Q8C006 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim35Q8C006 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim35Q8C006 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim35Q8C006 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim35Q8C006 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim35Q8C006 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Trim35Q8C006 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim35Q8C006 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim35Q8C006 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim35Q8C006 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim35Q8C006 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim35Q8C006 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Trim35Q8C006 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim35Q8C006 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim35Q8C006 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Trim35Q8C006 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.88■□□□□ 0.61
Trim35Q8C006 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trim35Q8C006 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim35Q8C006 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim35Q8C006 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim35Q8C006 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim35Q8C006 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim35Q8C006 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim35Q8C006 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim35Q8C006 Gm10849-201ENSMUST00000100397 618 ntBASIC18.87■□□□□ 0.61
Trim35Q8C006 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim35Q8C006 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim35Q8C006 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim35Q8C006 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim35Q8C006 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.87■□□□□ 0.61
Trim35Q8C006 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim35Q8C006 Rarb-207ENSMUST00000225921 2756 ntBASIC18.87■□□□□ 0.61
Trim35Q8C006 CT025525.2-201ENSMUST00000227743 423 ntBASIC18.87■□□□□ 0.61
Trim35Q8C006 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim35Q8C006 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim35Q8C006 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Trim35Q8C006 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim35Q8C006 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim35Q8C006 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim35Q8C006 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim35Q8C006 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim35Q8C006 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim35Q8C006 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Trim35Q8C006 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.86■□□□□ 0.61
Trim35Q8C006 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim35Q8C006 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim35Q8C006 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim35Q8C006 Gm29018-201ENSMUST00000188707 925 ntTSL 3 BASIC18.86■□□□□ 0.61
Trim35Q8C006 AC129597.1-201ENSMUST00000223046 1234 ntBASIC18.86■□□□□ 0.61
Trim35Q8C006 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim35Q8C006 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim35Q8C006 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim35Q8C006 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim35Q8C006 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms