Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf7Q8BTV2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Cpsf7Q8BTV2 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf7Q8BTV2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.47■□□□□ 0.55
Cpsf7Q8BTV2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf7Q8BTV2 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.46■□□□□ 0.55
Cpsf7Q8BTV2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf7Q8BTV2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cpsf7Q8BTV2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf7Q8BTV2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf7Q8BTV2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf7Q8BTV2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf7Q8BTV2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf7Q8BTV2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cpsf7Q8BTV2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf7Q8BTV2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf7Q8BTV2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf7Q8BTV2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf7Q8BTV2 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.45■□□□□ 0.54
Cpsf7Q8BTV2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cpsf7Q8BTV2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf7Q8BTV2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms