Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cc2d1bQ8BRN9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cc2d1bQ8BRN9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cc2d1bQ8BRN9 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.5■□□□□ 0.87
Cc2d1bQ8BRN9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.5■□□□□ 0.87
Cc2d1bQ8BRN9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cc2d1bQ8BRN9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cc2d1bQ8BRN9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cc2d1bQ8BRN9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cc2d1bQ8BRN9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cc2d1bQ8BRN9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cc2d1bQ8BRN9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cc2d1bQ8BRN9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cc2d1bQ8BRN9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cc2d1bQ8BRN9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cc2d1bQ8BRN9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cc2d1bQ8BRN9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cc2d1bQ8BRN9 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.47■□□□□ 0.87
Cc2d1bQ8BRN9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cc2d1bQ8BRN9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cc2d1bQ8BRN9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cc2d1bQ8BRN9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cc2d1bQ8BRN9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cc2d1bQ8BRN9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Cc2d1bQ8BRN9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cc2d1bQ8BRN9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cc2d1bQ8BRN9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cc2d1bQ8BRN9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cc2d1bQ8BRN9 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.45■□□□□ 0.86
Cc2d1bQ8BRN9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Cc2d1bQ8BRN9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cc2d1bQ8BRN9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cc2d1bQ8BRN9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cc2d1bQ8BRN9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cc2d1bQ8BRN9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cc2d1bQ8BRN9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cc2d1bQ8BRN9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cc2d1bQ8BRN9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cc2d1bQ8BRN9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cc2d1bQ8BRN9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cc2d1bQ8BRN9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.44■□□□□ 0.86
Cc2d1bQ8BRN9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.44■□□□□ 0.86
Cc2d1bQ8BRN9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.44■□□□□ 0.86
Cc2d1bQ8BRN9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cc2d1bQ8BRN9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cc2d1bQ8BRN9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cc2d1bQ8BRN9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Cc2d1bQ8BRN9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms