Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne4Q8BLR2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne4Q8BLR2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne4Q8BLR2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne4Q8BLR2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cpne4Q8BLR2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne4Q8BLR2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne4Q8BLR2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cpne4Q8BLR2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne4Q8BLR2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne4Q8BLR2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne4Q8BLR2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cpne4Q8BLR2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.57■□□□□ 0.24
Cpne4Q8BLR2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne4Q8BLR2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne4Q8BLR2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne4Q8BLR2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne4Q8BLR2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Cpne4Q8BLR2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cpne4Q8BLR2 Gm6211-202ENSMUST00000167849 925 ntBASIC16.56■□□□□ 0.24
Cpne4Q8BLR2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.56■□□□□ 0.24
Cpne4Q8BLR2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne4Q8BLR2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne4Q8BLR2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne4Q8BLR2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne4Q8BLR2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne4Q8BLR2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cpne4Q8BLR2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cpne4Q8BLR2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne4Q8BLR2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne4Q8BLR2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne4Q8BLR2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne4Q8BLR2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne4Q8BLR2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne4Q8BLR2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne4Q8BLR2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne4Q8BLR2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.53■□□□□ 0.24
Cpne4Q8BLR2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne4Q8BLR2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cpne4Q8BLR2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cpne4Q8BLR2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cpne4Q8BLR2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpne4Q8BLR2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Cpne4Q8BLR2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.52■□□□□ 0.24
Cpne4Q8BLR2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.52■□□□□ 0.24
Cpne4Q8BLR2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.52■□□□□ 0.24
Cpne4Q8BLR2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.52■□□□□ 0.24
Cpne4Q8BLR2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpne4Q8BLR2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cpne4Q8BLR2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpne4Q8BLR2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpne4Q8BLR2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cpne4Q8BLR2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cpne4Q8BLR2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cpne4Q8BLR2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cpne4Q8BLR2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms