Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh20Q8BIZ0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh20Q8BIZ0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Gm18671-201ENSMUST00000214826 683 ntBASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdh20Q8BIZ0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh20Q8BIZ0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdh20Q8BIZ0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh20Q8BIZ0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh20Q8BIZ0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh20Q8BIZ0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh20Q8BIZ0 Gm9988-201ENSMUST00000069786 435 ntBASIC18.02■□□□□ 0.48
Pcdh20Q8BIZ0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Pcdh20Q8BIZ0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh20Q8BIZ0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.01■□□□□ 0.47
Pcdh20Q8BIZ0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh20Q8BIZ0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh20Q8BIZ0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh20Q8BIZ0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh20Q8BIZ0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh20Q8BIZ0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh20Q8BIZ0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh20Q8BIZ0 Gm42569-201ENSMUST00000200539 472 ntBASIC17.99■□□□□ 0.47
Pcdh20Q8BIZ0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms