Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Depdc1bQ8BH88 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Depdc1bQ8BH88 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1bQ8BH88 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1bQ8BH88 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1bQ8BH88 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Depdc1bQ8BH88 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.14■□□□□ 0.81
Depdc1bQ8BH88 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1bQ8BH88 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1bQ8BH88 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Gm10602-201ENSMUST00000098239 609 ntBASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Depdc1bQ8BH88 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Depdc1bQ8BH88 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1bQ8BH88 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1bQ8BH88 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1bQ8BH88 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1bQ8BH88 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.11■□□□□ 0.81
Depdc1bQ8BH88 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.11■□□□□ 0.81
Depdc1bQ8BH88 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.11■□□□□ 0.81
Depdc1bQ8BH88 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1bQ8BH88 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Depdc1bQ8BH88 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Depdc1bQ8BH88 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Depdc1bQ8BH88 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1bQ8BH88 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1bQ8BH88 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1bQ8BH88 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.1■□□□□ 0.81
Depdc1bQ8BH88 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.1■□□□□ 0.81
Depdc1bQ8BH88 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1bQ8BH88 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Depdc1bQ8BH88 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1bQ8BH88 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1bQ8BH88 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1bQ8BH88 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1bQ8BH88 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1bQ8BH88 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Depdc1bQ8BH88 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Depdc1bQ8BH88 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1bQ8BH88 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1bQ8BH88 Gm38205-201ENSMUST00000192243 258 ntBASIC20.09■□□□□ 0.81
Depdc1bQ8BH88 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1bQ8BH88 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.09■□□□□ 0.81
Depdc1bQ8BH88 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1bQ8BH88 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1bQ8BH88 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1bQ8BH88 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1bQ8BH88 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Depdc1bQ8BH88 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Depdc1bQ8BH88 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Depdc1bQ8BH88 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Depdc1bQ8BH88 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
Depdc1bQ8BH88 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Depdc1bQ8BH88 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Depdc1bQ8BH88 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Depdc1bQ8BH88 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Depdc1bQ8BH88 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Depdc1bQ8BH88 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Depdc1bQ8BH88 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Depdc1bQ8BH88 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms