Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smndc1Q8BGT7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smndc1Q8BGT7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smndc1Q8BGT7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.91■□□□□ 0.46
Smndc1Q8BGT7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smndc1Q8BGT7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Smndc1Q8BGT7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.91■□□□□ 0.46
Smndc1Q8BGT7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smndc1Q8BGT7 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.91■□□□□ 0.46
Smndc1Q8BGT7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.91■□□□□ 0.46
Smndc1Q8BGT7 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.91■□□□□ 0.46
Smndc1Q8BGT7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smndc1Q8BGT7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Smndc1Q8BGT7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smndc1Q8BGT7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smndc1Q8BGT7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smndc1Q8BGT7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Smndc1Q8BGT7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Smndc1Q8BGT7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
Smndc1Q8BGT7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smndc1Q8BGT7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smndc1Q8BGT7 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.89■□□□□ 0.45
Smndc1Q8BGT7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smndc1Q8BGT7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
Smndc1Q8BGT7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Smndc1Q8BGT7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.89■□□□□ 0.45
Smndc1Q8BGT7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.89■□□□□ 0.45
Smndc1Q8BGT7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smndc1Q8BGT7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Smndc1Q8BGT7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smndc1Q8BGT7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smndc1Q8BGT7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Smndc1Q8BGT7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smndc1Q8BGT7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smndc1Q8BGT7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smndc1Q8BGT7 Serp2-204ENSMUST00000228055 705 ntBASIC17.88■□□□□ 0.45
Smndc1Q8BGT7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smndc1Q8BGT7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smndc1Q8BGT7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smndc1Q8BGT7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smndc1Q8BGT7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smndc1Q8BGT7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smndc1Q8BGT7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smndc1Q8BGT7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Smndc1Q8BGT7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smndc1Q8BGT7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smndc1Q8BGT7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smndc1Q8BGT7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.87■□□□□ 0.45
Smndc1Q8BGT7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smndc1Q8BGT7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smndc1Q8BGT7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Smndc1Q8BGT7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.87■□□□□ 0.45
Smndc1Q8BGT7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smndc1Q8BGT7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smndc1Q8BGT7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smndc1Q8BGT7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smndc1Q8BGT7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smndc1Q8BGT7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smndc1Q8BGT7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smndc1Q8BGT7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Smndc1Q8BGT7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smndc1Q8BGT7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Smndc1Q8BGT7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smndc1Q8BGT7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smndc1Q8BGT7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smndc1Q8BGT7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smndc1Q8BGT7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Smndc1Q8BGT7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smndc1Q8BGT7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smndc1Q8BGT7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Smndc1Q8BGT7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smndc1Q8BGT7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smndc1Q8BGT7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smndc1Q8BGT7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smndc1Q8BGT7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms