Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
Samm50Q8BGH2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Samm50Q8BGH2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Samm50Q8BGH2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.67■■□□□ 1.06
Samm50Q8BGH2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.67■■□□□ 1.06
Samm50Q8BGH2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Samm50Q8BGH2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Samm50Q8BGH2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.66■■□□□ 1.06
Samm50Q8BGH2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Samm50Q8BGH2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Samm50Q8BGH2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.66■■□□□ 1.06
Samm50Q8BGH2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Samm50Q8BGH2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Samm50Q8BGH2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Samm50Q8BGH2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Samm50Q8BGH2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Samm50Q8BGH2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Samm50Q8BGH2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Samm50Q8BGH2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Samm50Q8BGH2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
Samm50Q8BGH2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Samm50Q8BGH2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Samm50Q8BGH2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.65■■□□□ 1.06
Samm50Q8BGH2 Gm10033-202ENSMUST00000211874 928 ntBASIC21.65■■□□□ 1.06
Samm50Q8BGH2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Samm50Q8BGH2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.65■■□□□ 1.06
Samm50Q8BGH2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.65■■□□□ 1.06
Samm50Q8BGH2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.65■■□□□ 1.06
Samm50Q8BGH2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Samm50Q8BGH2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Samm50Q8BGH2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Samm50Q8BGH2 Gm13234-201ENSMUST00000120010 747 ntBASIC21.64■■□□□ 1.05
Samm50Q8BGH2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Samm50Q8BGH2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Samm50Q8BGH2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Samm50Q8BGH2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Samm50Q8BGH2 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.64■■□□□ 1.05
Samm50Q8BGH2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Samm50Q8BGH2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Samm50Q8BGH2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Samm50Q8BGH2 AV356131-201ENSMUST00000206201 750 ntBASIC21.63■■□□□ 1.05
Samm50Q8BGH2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Samm50Q8BGH2 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.63■■□□□ 1.05
Samm50Q8BGH2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Samm50Q8BGH2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Samm50Q8BGH2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Samm50Q8BGH2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Samm50Q8BGH2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Samm50Q8BGH2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Samm50Q8BGH2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.62■■□□□ 1.05
Samm50Q8BGH2 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.62■■□□□ 1.05
Samm50Q8BGH2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Samm50Q8BGH2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Samm50Q8BGH2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Samm50Q8BGH2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
Samm50Q8BGH2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.62■■□□□ 1.05
Samm50Q8BGH2 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.62■■□□□ 1.05
Samm50Q8BGH2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Samm50Q8BGH2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.6■■□□□ 1.05
Samm50Q8BGH2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 Gm7291-201ENSMUST00000199147 382 ntBASIC21.6■■□□□ 1.05
Samm50Q8BGH2 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.6■■□□□ 1.05
Samm50Q8BGH2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Samm50Q8BGH2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Samm50Q8BGH2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Samm50Q8BGH2 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.59■■□□□ 1.05
Samm50Q8BGH2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
Samm50Q8BGH2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms