Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cspg5Q71M36 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cspg5Q71M36 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cspg5Q71M36 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cspg5Q71M36 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
Cspg5Q71M36 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cspg5Q71M36 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cspg5Q71M36 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.13■□□□□ 0.65
Cspg5Q71M36 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cspg5Q71M36 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.13■□□□□ 0.65
Cspg5Q71M36 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cspg5Q71M36 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cspg5Q71M36 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.13■□□□□ 0.65
Cspg5Q71M36 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.13■□□□□ 0.65
Cspg5Q71M36 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cspg5Q71M36 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cspg5Q71M36 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Cspg5Q71M36 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cspg5Q71M36 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cspg5Q71M36 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cspg5Q71M36 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cspg5Q71M36 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cspg5Q71M36 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cspg5Q71M36 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.12■□□□□ 0.65
Cspg5Q71M36 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.12■□□□□ 0.65
Cspg5Q71M36 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cspg5Q71M36 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cspg5Q71M36 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cspg5Q71M36 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cspg5Q71M36 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cspg5Q71M36 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Cspg5Q71M36 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cspg5Q71M36 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cspg5Q71M36 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cspg5Q71M36 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cspg5Q71M36 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.11■□□□□ 0.65
Cspg5Q71M36 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cspg5Q71M36 Gm13836-201ENSMUST00000121159 501 ntBASIC19.11■□□□□ 0.65
Cspg5Q71M36 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cspg5Q71M36 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cspg5Q71M36 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cspg5Q71M36 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Gm7977-201ENSMUST00000193787 748 ntBASIC19.1■□□□□ 0.65
Cspg5Q71M36 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cspg5Q71M36 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cspg5Q71M36 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cspg5Q71M36 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.09■□□□□ 0.65
Cspg5Q71M36 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cspg5Q71M36 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cspg5Q71M36 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cspg5Q71M36 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cspg5Q71M36 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cspg5Q71M36 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cspg5Q71M36 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cspg5Q71M36 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cspg5Q71M36 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cspg5Q71M36 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cspg5Q71M36 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cspg5Q71M36 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.08■□□□□ 0.65
Cspg5Q71M36 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cspg5Q71M36 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cspg5Q71M36 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cspg5Q71M36 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cspg5Q71M36 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cspg5Q71M36 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cspg5Q71M36 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cspg5Q71M36 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cspg5Q71M36 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cspg5Q71M36 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cspg5Q71M36 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms