Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 Gm6345-202ENSMUST00000180900 204 ntBASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 Gm7461-201ENSMUST00000058918 827 ntBASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc85bQ6PDY0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Gm43183-201ENSMUST00000200632 547 ntBASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85bQ6PDY0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85bQ6PDY0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Ccdc85bQ6PDY0 AA414768-201ENSMUST00000121924 1257 ntBASIC19.23■□□□□ 0.67
Ccdc85bQ6PDY0 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.23■□□□□ 0.67
Ccdc85bQ6PDY0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85bQ6PDY0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85bQ6PDY0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ccdc85bQ6PDY0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85bQ6PDY0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85bQ6PDY0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85bQ6PDY0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85bQ6PDY0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85bQ6PDY0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85bQ6PDY0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Gm14859-201ENSMUST00000117752 357 ntBASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Gm11927-201ENSMUST00000118472 759 ntBASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Ank2-226ENSMUST00000189368 339 ntBASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc85bQ6PDY0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc85bQ6PDY0 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.21■□□□□ 0.67
Ccdc85bQ6PDY0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc85bQ6PDY0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc85bQ6PDY0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc85bQ6PDY0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc85bQ6PDY0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc85bQ6PDY0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc85bQ6PDY0 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.21■□□□□ 0.67
Ccdc85bQ6PDY0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc85bQ6PDY0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc85bQ6PDY0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc85bQ6PDY0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc85bQ6PDY0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc85bQ6PDY0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc85bQ6PDY0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc85bQ6PDY0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc85bQ6PDY0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc85bQ6PDY0 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.2■□□□□ 0.66
Ccdc85bQ6PDY0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc85bQ6PDY0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc85bQ6PDY0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc85bQ6PDY0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc85bQ6PDY0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc85bQ6PDY0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc85bQ6PDY0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc85bQ6PDY0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc85bQ6PDY0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc85bQ6PDY0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc85bQ6PDY0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc85bQ6PDY0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc85bQ6PDY0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc85bQ6PDY0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc85bQ6PDY0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc85bQ6PDY0 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.19■□□□□ 0.66
Ccdc85bQ6PDY0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc85bQ6PDY0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc85bQ6PDY0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc85bQ6PDY0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms