Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six2Q62232 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six2Q62232 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Six2Q62232 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Six2Q62232 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six2Q62232 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.81■□□□□ 0.76
Six2Q62232 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six2Q62232 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six2Q62232 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six2Q62232 Gm6420-201ENSMUST00000193885 723 ntBASIC19.81■□□□□ 0.76
Six2Q62232 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six2Q62232 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six2Q62232 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Six2Q62232 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six2Q62232 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Six2Q62232 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six2Q62232 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six2Q62232 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Six2Q62232 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Six2Q62232 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six2Q62232 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Six2Q62232 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Six2Q62232 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six2Q62232 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six2Q62232 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Six2Q62232 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six2Q62232 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Six2Q62232 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six2Q62232 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.79■□□□□ 0.76
Six2Q62232 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six2Q62232 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Six2Q62232 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.79■□□□□ 0.76
Six2Q62232 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Six2Q62232 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.79■□□□□ 0.76
Six2Q62232 Nespas-201ENSMUST00000143738 1083 ntBASIC19.79■□□□□ 0.76
Six2Q62232 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Six2Q62232 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Six2Q62232 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six2Q62232 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six2Q62232 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six2Q62232 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six2Q62232 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six2Q62232 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.78■□□□□ 0.76
Six2Q62232 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six2Q62232 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Six2Q62232 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Six2Q62232 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.78■□□□□ 0.76
Six2Q62232 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six2Q62232 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Six2Q62232 Gm5874-201ENSMUST00000096101 508 ntBASIC19.78■□□□□ 0.76
Six2Q62232 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Six2Q62232 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.78■□□□□ 0.76
Six2Q62232 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six2Q62232 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six2Q62232 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Six2Q62232 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Six2Q62232 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Six2Q62232 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Six2Q62232 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.77■□□□□ 0.76
Six2Q62232 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.77■□□□□ 0.76
Six2Q62232 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Six2Q62232 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Six2Q62232 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Six2Q62232 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Six2Q62232 Gm42642-201ENSMUST00000200683 355 ntBASIC19.77■□□□□ 0.76
Six2Q62232 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.77■□□□□ 0.76
Six2Q62232 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Six2Q62232 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six2Q62232 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six2Q62232 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six2Q62232 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.76■□□□□ 0.75
Six2Q62232 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Six2Q62232 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six2Q62232 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Six2Q62232 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
Six2Q62232 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six2Q62232 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Six2Q62232 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six2Q62232 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six2Q62232 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six2Q62232 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six2Q62232 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Six2Q62232 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Six2Q62232 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six2Q62232 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six2Q62232 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six2Q62232 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six2Q62232 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.75■□□□□ 0.75
Six2Q62232 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six2Q62232 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.75■□□□□ 0.75
Six2Q62232 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Six2Q62232 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six2Q62232 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Six2Q62232 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six2Q62232 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six2Q62232 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six2Q62232 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.74■□□□□ 0.75
Six2Q62232 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six2Q62232 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Six2Q62232 Gm26571-201ENSMUST00000181399 666 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms