Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.18□□□□□ -0.14
Notch3Q61982 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.17□□□□□ -0.14
Notch3Q61982 Iqck-206ENSMUST00000208658 2891 ntBASIC14.17□□□□□ -0.14
Notch3Q61982 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Notch3Q61982 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Notch3Q61982 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Notch3Q61982 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Notch3Q61982 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Notch3Q61982 Rab3c-203ENSMUST00000224180 967 ntBASIC14.17□□□□□ -0.14
Notch3Q61982 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Notch3Q61982 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.17□□□□□ -0.14
Notch3Q61982 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.17□□□□□ -0.14
Notch3Q61982 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Notch3Q61982 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.17□□□□□ -0.14
Notch3Q61982 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Notch3Q61982 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Notch3Q61982 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Notch3Q61982 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Notch3Q61982 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.16□□□□□ -0.14
Notch3Q61982 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Notch3Q61982 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.16□□□□□ -0.14
Notch3Q61982 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Notch3Q61982 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Notch3Q61982 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Notch3Q61982 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Notch3Q61982 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Notch3Q61982 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Notch3Q61982 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Notch3Q61982 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Notch3Q61982 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Notch3Q61982 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Notch3Q61982 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Notch3Q61982 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Notch3Q61982 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Notch3Q61982 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Notch3Q61982 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Notch3Q61982 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.16□□□□□ -0.14
Notch3Q61982 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Notch3Q61982 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.16□□□□□ -0.14
Notch3Q61982 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Notch3Q61982 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Notch3Q61982 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Notch3Q61982 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.15□□□□□ -0.14
Notch3Q61982 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.15□□□□□ -0.14
Notch3Q61982 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Notch3Q61982 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Notch3Q61982 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Notch3Q61982 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Notch3Q61982 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Notch3Q61982 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Notch3Q61982 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Notch3Q61982 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.15□□□□□ -0.14
Notch3Q61982 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Notch3Q61982 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Notch3Q61982 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Notch3Q61982 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Notch3Q61982 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Notch3Q61982 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Notch3Q61982 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Notch3Q61982 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Notch3Q61982 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Notch3Q61982 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Notch3Q61982 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Notch3Q61982 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Notch3Q61982 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Notch3Q61982 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Notch3Q61982 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.14□□□□□ -0.15
Notch3Q61982 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Notch3Q61982 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Notch3Q61982 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Notch3Q61982 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Notch3Q61982 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Notch3Q61982 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Notch3Q61982 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.14□□□□□ -0.15
Notch3Q61982 Gm13836-201ENSMUST00000121159 501 ntBASIC14.14□□□□□ -0.15
Notch3Q61982 Gm7860-201ENSMUST00000121190 879 ntBASIC14.14□□□□□ -0.15
Notch3Q61982 Gm6576-201ENSMUST00000169678 883 ntBASIC14.14□□□□□ -0.15
Notch3Q61982 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Notch3Q61982 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Notch3Q61982 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Notch3Q61982 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Notch3Q61982 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Notch3Q61982 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Notch3Q61982 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Notch3Q61982 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.13□□□□□ -0.15
Notch3Q61982 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Notch3Q61982 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.13□□□□□ -0.15
Notch3Q61982 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Notch3Q61982 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Notch3Q61982 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.13□□□□□ -0.15
Notch3Q61982 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Notch3Q61982 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Notch3Q61982 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Notch3Q61982 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Notch3Q61982 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Notch3Q61982 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.13□□□□□ -0.15
Notch3Q61982 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Notch3Q61982 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Notch3Q61982 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Notch3Q61982 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms