Protein–RNA interactions for Protein: Q60764

Mkrn3, Probable E3 ubiquitin-protein ligase makorin-3, mousemouse

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mkrn3Q60764 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mkrn3Q60764 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mkrn3Q60764 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Mkrn3Q60764 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Mkrn3Q60764 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mkrn3Q60764 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mkrn3Q60764 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mkrn3Q60764 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mkrn3Q60764 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Mkrn3Q60764 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mkrn3Q60764 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mkrn3Q60764 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mkrn3Q60764 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mkrn3Q60764 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mkrn3Q60764 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mkrn3Q60764 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Mkrn3Q60764 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mkrn3Q60764 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mkrn3Q60764 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mkrn3Q60764 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mkrn3Q60764 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mkrn3Q60764 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.64■□□□□ 0.9
Mkrn3Q60764 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mkrn3Q60764 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Mkrn3Q60764 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mkrn3Q60764 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Mkrn3Q60764 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mkrn3Q60764 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.64■□□□□ 0.89
Mkrn3Q60764 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.63■□□□□ 0.89
Mkrn3Q60764 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mkrn3Q60764 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.62■□□□□ 0.89
Mkrn3Q60764 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Mkrn3Q60764 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mkrn3Q60764 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Mkrn3Q60764 Gm6211-202ENSMUST00000167849 925 ntBASIC20.62■□□□□ 0.89
Mkrn3Q60764 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mkrn3Q60764 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mkrn3Q60764 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mkrn3Q60764 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mkrn3Q60764 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mkrn3Q60764 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mkrn3Q60764 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mkrn3Q60764 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mkrn3Q60764 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.62■□□□□ 0.89
Mkrn3Q60764 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mkrn3Q60764 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.61■□□□□ 0.89
Mkrn3Q60764 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Mkrn3Q60764 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Mkrn3Q60764 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Mkrn3Q60764 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Gm4968-201ENSMUST00000071458 858 ntBASIC20.6■□□□□ 0.89
Mkrn3Q60764 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC20.6■□□□□ 0.89
Mkrn3Q60764 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mkrn3Q60764 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Mkrn3Q60764 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mkrn3Q60764 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mkrn3Q60764 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Mkrn3Q60764 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms