Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ClpbQ60649 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClpbQ60649 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.74■□□□□ 0.43
ClpbQ60649 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.74■□□□□ 0.43
ClpbQ60649 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClpbQ60649 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClpbQ60649 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClpbQ60649 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ClpbQ60649 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClpbQ60649 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.74■□□□□ 0.43
ClpbQ60649 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ClpbQ60649 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClpbQ60649 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClpbQ60649 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClpbQ60649 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
ClpbQ60649 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClpbQ60649 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClpbQ60649 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ClpbQ60649 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClpbQ60649 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClpbQ60649 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ClpbQ60649 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.73■□□□□ 0.43
ClpbQ60649 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ClpbQ60649 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClpbQ60649 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClpbQ60649 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.72■□□□□ 0.43
ClpbQ60649 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClpbQ60649 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClpbQ60649 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.72■□□□□ 0.43
ClpbQ60649 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
ClpbQ60649 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClpbQ60649 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClpbQ60649 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ClpbQ60649 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClpbQ60649 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.72■□□□□ 0.43
ClpbQ60649 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ClpbQ60649 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClpbQ60649 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClpbQ60649 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClpbQ60649 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClpbQ60649 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
ClpbQ60649 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.71■□□□□ 0.43
ClpbQ60649 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClpbQ60649 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClpbQ60649 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClpbQ60649 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ClpbQ60649 Gm12933-201ENSMUST00000120203 872 ntBASIC17.71■□□□□ 0.43
ClpbQ60649 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ClpbQ60649 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.71■□□□□ 0.43
ClpbQ60649 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ClpbQ60649 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ClpbQ60649 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClpbQ60649 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ClpbQ60649 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClpbQ60649 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClpbQ60649 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
ClpbQ60649 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClpbQ60649 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClpbQ60649 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClpbQ60649 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ClpbQ60649 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ClpbQ60649 Gm10602-201ENSMUST00000098239 609 ntBASIC17.7■□□□□ 0.42
ClpbQ60649 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClpbQ60649 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
ClpbQ60649 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClpbQ60649 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClpbQ60649 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClpbQ60649 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ClpbQ60649 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClpbQ60649 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.69■□□□□ 0.42
ClpbQ60649 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
ClpbQ60649 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClpbQ60649 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClpbQ60649 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClpbQ60649 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClpbQ60649 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClpbQ60649 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ClpbQ60649 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClpbQ60649 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClpbQ60649 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClpbQ60649 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClpbQ60649 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.69■□□□□ 0.42
ClpbQ60649 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClpbQ60649 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpbQ60649 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
ClpbQ60649 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpbQ60649 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpbQ60649 Gm13534-201ENSMUST00000121169 513 ntBASIC17.68■□□□□ 0.42
ClpbQ60649 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ClpbQ60649 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ClpbQ60649 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.68■□□□□ 0.42
ClpbQ60649 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ClpbQ60649 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.68■□□□□ 0.42
ClpbQ60649 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.68■□□□□ 0.42
ClpbQ60649 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpbQ60649 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ClpbQ60649 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.68■□□□□ 0.42
ClpbQ60649 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpbQ60649 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpbQ60649 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms