Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Gm7860-201ENSMUST00000121190 879 ntBASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Rarb-207ENSMUST00000225921 2756 ntBASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7d-3Q5R1I1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7d-3Q5R1I1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav7d-3Q5R1I1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav7d-3Q5R1I1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav7d-3Q5R1I1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7d-3Q5R1I1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7d-3Q5R1I1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav7d-3Q5R1I1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav7d-3Q5R1I1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Trav7d-3Q5R1I1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7d-3Q5R1I1 Gm27454-201ENSMUST00000185090 204 ntBASIC13.58□□□□□ -0.24
Trav7d-3Q5R1I1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7d-3Q5R1I1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav7d-3Q5R1I1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav7d-3Q5R1I1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Trav7d-3Q5R1I1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav7d-3Q5R1I1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Gm26833-201ENSMUST00000180899 440 ntBASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav7d-3Q5R1I1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-3Q5R1I1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-3Q5R1I1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms