Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-3Q5R1C3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-3Q5R1C3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC13.9□□□□□ -0.19
Trav3-3Q5R1C3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trav3-3Q5R1C3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav3-3Q5R1C3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Gm5921-201ENSMUST00000075898 882 ntBASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-3Q5R1C3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav3-3Q5R1C3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-3Q5R1C3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-3Q5R1C3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-3Q5R1C3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-3Q5R1C3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav3-3Q5R1C3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-3Q5R1C3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-3Q5R1C3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-3Q5R1C3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-3Q5R1C3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-3Q5R1C3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-3Q5R1C3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-3Q5R1C3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Trav3-3Q5R1C3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-3Q5R1C3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-3Q5R1C3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-3Q5R1C3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Trav3-3Q5R1C3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms