Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clhc1Q5M6W3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clhc1Q5M6W3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Clhc1Q5M6W3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clhc1Q5M6W3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clhc1Q5M6W3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.85■□□□□ 0.45
Clhc1Q5M6W3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.85■□□□□ 0.45
Clhc1Q5M6W3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.85■□□□□ 0.45
Clhc1Q5M6W3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clhc1Q5M6W3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clhc1Q5M6W3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clhc1Q5M6W3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clhc1Q5M6W3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Clhc1Q5M6W3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clhc1Q5M6W3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Clhc1Q5M6W3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Clhc1Q5M6W3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clhc1Q5M6W3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Clhc1Q5M6W3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clhc1Q5M6W3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Clhc1Q5M6W3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Clhc1Q5M6W3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clhc1Q5M6W3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clhc1Q5M6W3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clhc1Q5M6W3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Clhc1Q5M6W3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clhc1Q5M6W3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clhc1Q5M6W3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clhc1Q5M6W3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clhc1Q5M6W3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clhc1Q5M6W3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clhc1Q5M6W3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clhc1Q5M6W3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Clhc1Q5M6W3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clhc1Q5M6W3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clhc1Q5M6W3 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.82■□□□□ 0.44
Clhc1Q5M6W3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clhc1Q5M6W3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.82■□□□□ 0.44
Clhc1Q5M6W3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clhc1Q5M6W3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clhc1Q5M6W3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clhc1Q5M6W3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.82■□□□□ 0.44
Clhc1Q5M6W3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clhc1Q5M6W3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.82■□□□□ 0.44
Clhc1Q5M6W3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clhc1Q5M6W3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Gm27454-201ENSMUST00000185090 204 ntBASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clhc1Q5M6W3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clhc1Q5M6W3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clhc1Q5M6W3 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.79■□□□□ 0.44
Clhc1Q5M6W3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clhc1Q5M6W3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clhc1Q5M6W3 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms