Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.64■□□□□ 0.73
Syne3Q4FZC9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Syne3Q4FZC9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Syne3Q4FZC9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Syne3Q4FZC9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Syne3Q4FZC9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Syne3Q4FZC9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Syne3Q4FZC9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Syne3Q4FZC9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Syne3Q4FZC9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Syne3Q4FZC9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Syne3Q4FZC9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Syne3Q4FZC9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Syne3Q4FZC9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Syne3Q4FZC9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Syne3Q4FZC9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syne3Q4FZC9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Rarb-207ENSMUST00000225921 2756 ntBASIC19.61■□□□□ 0.73
Syne3Q4FZC9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syne3Q4FZC9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syne3Q4FZC9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syne3Q4FZC9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.6■□□□□ 0.73
Syne3Q4FZC9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.6■□□□□ 0.73
Syne3Q4FZC9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syne3Q4FZC9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Syne3Q4FZC9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Syne3Q4FZC9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Syne3Q4FZC9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Gm13146-201ENSMUST00000118508 780 ntBASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.59■□□□□ 0.73
Syne3Q4FZC9 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Syne3Q4FZC9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syne3Q4FZC9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syne3Q4FZC9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syne3Q4FZC9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syne3Q4FZC9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syne3Q4FZC9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syne3Q4FZC9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Syne3Q4FZC9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.58■□□□□ 0.73
Syne3Q4FZC9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Syne3Q4FZC9 Gm26571-201ENSMUST00000181399 666 ntBASIC19.58■□□□□ 0.72
Syne3Q4FZC9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Syne3Q4FZC9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.58■□□□□ 0.72
Syne3Q4FZC9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Syne3Q4FZC9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Syne3Q4FZC9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Syne3Q4FZC9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Syne3Q4FZC9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms