Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Tmem40Q4FJU9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tmem40Q4FJU9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Tmem40Q4FJU9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem40Q4FJU9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem40Q4FJU9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem40Q4FJU9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem40Q4FJU9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem40Q4FJU9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem40Q4FJU9 Gm12896-201ENSMUST00000118430 226 ntBASIC15.71■□□□□ 0.11
Tmem40Q4FJU9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.71■□□□□ 0.11
Tmem40Q4FJU9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Tmem40Q4FJU9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem40Q4FJU9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem40Q4FJU9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem40Q4FJU9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Tmem40Q4FJU9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem40Q4FJU9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Tmem40Q4FJU9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tmem40Q4FJU9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Gm7977-201ENSMUST00000193787 748 ntBASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms