Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim80Q3V061 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim80Q3V061 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim80Q3V061 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trim80Q3V061 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim80Q3V061 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim80Q3V061 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim80Q3V061 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim80Q3V061 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim80Q3V061 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim80Q3V061 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim80Q3V061 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim80Q3V061 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim80Q3V061 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim80Q3V061 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim80Q3V061 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim80Q3V061 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.08■□□□□ 0.65
Trim80Q3V061 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim80Q3V061 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.08■□□□□ 0.65
Trim80Q3V061 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.08■□□□□ 0.65
Trim80Q3V061 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim80Q3V061 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim80Q3V061 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.08■□□□□ 0.64
Trim80Q3V061 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.08■□□□□ 0.64
Trim80Q3V061 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim80Q3V061 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim80Q3V061 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Trim80Q3V061 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim80Q3V061 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim80Q3V061 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim80Q3V061 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim80Q3V061 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim80Q3V061 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trim80Q3V061 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim80Q3V061 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim80Q3V061 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim80Q3V061 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim80Q3V061 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim80Q3V061 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim80Q3V061 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim80Q3V061 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim80Q3V061 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim80Q3V061 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.07■□□□□ 0.64
Trim80Q3V061 Gm43530-201ENSMUST00000195920 274 ntBASIC19.07■□□□□ 0.64
Trim80Q3V061 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.07■□□□□ 0.64
Trim80Q3V061 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim80Q3V061 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim80Q3V061 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim80Q3V061 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim80Q3V061 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim80Q3V061 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim80Q3V061 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim80Q3V061 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim80Q3V061 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim80Q3V061 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim80Q3V061 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim80Q3V061 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim80Q3V061 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim80Q3V061 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim80Q3V061 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim80Q3V061 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Trim80Q3V061 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.06■□□□□ 0.64
Trim80Q3V061 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim80Q3V061 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim80Q3V061 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim80Q3V061 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim80Q3V061 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim80Q3V061 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim80Q3V061 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trim80Q3V061 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim80Q3V061 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.05■□□□□ 0.64
Trim80Q3V061 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim80Q3V061 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trim80Q3V061 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim80Q3V061 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim80Q3V061 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Trim80Q3V061 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim80Q3V061 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Trim80Q3V061 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Trim80Q3V061 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trim80Q3V061 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.04■□□□□ 0.64
Trim80Q3V061 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim80Q3V061 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim80Q3V061 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trim80Q3V061 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim80Q3V061 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim80Q3V061 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim80Q3V061 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim80Q3V061 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trim80Q3V061 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Trim80Q3V061 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim80Q3V061 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim80Q3V061 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim80Q3V061 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim80Q3V061 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim80Q3V061 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim80Q3V061 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Trim80Q3V061 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim80Q3V061 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim80Q3V061 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms