Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdkl5Q3UTQ8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdkl5Q3UTQ8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.51■■□□□ 1.03
Cdkl5Q3UTQ8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdkl5Q3UTQ8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cdkl5Q3UTQ8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Cdkl5Q3UTQ8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.5■■□□□ 1.03
Cdkl5Q3UTQ8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
Cdkl5Q3UTQ8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cdkl5Q3UTQ8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdkl5Q3UTQ8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cdkl5Q3UTQ8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Cdkl5Q3UTQ8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdkl5Q3UTQ8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Cdkl5Q3UTQ8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cdkl5Q3UTQ8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdkl5Q3UTQ8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Cdkl5Q3UTQ8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
Cdkl5Q3UTQ8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.49■■□□□ 1.03
Cdkl5Q3UTQ8 Gm7514-201ENSMUST00000209475 934 ntBASIC21.49■■□□□ 1.03
Cdkl5Q3UTQ8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdkl5Q3UTQ8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdkl5Q3UTQ8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
Cdkl5Q3UTQ8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdkl5Q3UTQ8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.48■■□□□ 1.03
Cdkl5Q3UTQ8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdkl5Q3UTQ8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdkl5Q3UTQ8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Cdkl5Q3UTQ8 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.47■■□□□ 1.03
Cdkl5Q3UTQ8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdkl5Q3UTQ8 AV356131-201ENSMUST00000206201 750 ntBASIC21.47■■□□□ 1.03
Cdkl5Q3UTQ8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.47■■□□□ 1.03
Cdkl5Q3UTQ8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdkl5Q3UTQ8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdkl5Q3UTQ8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdkl5Q3UTQ8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdkl5Q3UTQ8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cdkl5Q3UTQ8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdkl5Q3UTQ8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cdkl5Q3UTQ8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdkl5Q3UTQ8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.46■■□□□ 1.03
Cdkl5Q3UTQ8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.46■■□□□ 1.03
Cdkl5Q3UTQ8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cdkl5Q3UTQ8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdkl5Q3UTQ8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdkl5Q3UTQ8 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.46■■□□□ 1.03
Cdkl5Q3UTQ8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdkl5Q3UTQ8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdkl5Q3UTQ8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdkl5Q3UTQ8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdkl5Q3UTQ8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cdkl5Q3UTQ8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cdkl5Q3UTQ8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdkl5Q3UTQ8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdkl5Q3UTQ8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdkl5Q3UTQ8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Gm8495-201ENSMUST00000188740 694 ntBASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Gm6420-201ENSMUST00000193885 723 ntBASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.44■■□□□ 1.02
Cdkl5Q3UTQ8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdkl5Q3UTQ8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdkl5Q3UTQ8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Cdkl5Q3UTQ8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.43■■□□□ 1.02
Cdkl5Q3UTQ8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Cdkl5Q3UTQ8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.43■■□□□ 1.02
Cdkl5Q3UTQ8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Cdkl5Q3UTQ8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.43■■□□□ 1.02
Cdkl5Q3UTQ8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdkl5Q3UTQ8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cdkl5Q3UTQ8 Nespas-201ENSMUST00000143738 1083 ntBASIC21.42■■□□□ 1.02
Cdkl5Q3UTQ8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.42■■□□□ 1.02
Cdkl5Q3UTQ8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdkl5Q3UTQ8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms