Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Mir3081-201ENSMUST00000175305 84 ntBASIC17.2■□□□□ 0.34
Spg11Q3UHA3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg11Q3UHA3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Spg11Q3UHA3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg11Q3UHA3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Spg11Q3UHA3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Spg11Q3UHA3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg11Q3UHA3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.2■□□□□ 0.34
Spg11Q3UHA3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg11Q3UHA3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg11Q3UHA3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.19■□□□□ 0.34
Spg11Q3UHA3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Spg11Q3UHA3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.19■□□□□ 0.34
Spg11Q3UHA3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Spg11Q3UHA3 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.19■□□□□ 0.34
Spg11Q3UHA3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg11Q3UHA3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Spg11Q3UHA3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg11Q3UHA3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg11Q3UHA3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg11Q3UHA3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.19■□□□□ 0.34
Spg11Q3UHA3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg11Q3UHA3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg11Q3UHA3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg11Q3UHA3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg11Q3UHA3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Gm5864-201ENSMUST00000202263 970 ntBASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Mir8098-201ENSMUST00000184011 137 ntBASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Spg11Q3UHA3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Gm27459-201ENSMUST00000184860 107 ntBASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg11Q3UHA3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Spg11Q3UHA3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Spg11Q3UHA3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Spg11Q3UHA3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Spg11Q3UHA3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.16■□□□□ 0.34
Spg11Q3UHA3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Spg11Q3UHA3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Spg11Q3UHA3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Spg11Q3UHA3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Spg11Q3UHA3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Spg11Q3UHA3 Gm17808-201ENSMUST00000200859 894 ntBASIC17.16■□□□□ 0.34
Spg11Q3UHA3 Birc2-201ENSMUST00000054878 378 ntBASIC17.16■□□□□ 0.34
Spg11Q3UHA3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Spg11Q3UHA3 Zfp783-201ENSMUST00000095946 670 ntBASIC17.16■□□□□ 0.34
Spg11Q3UHA3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Spg11Q3UHA3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Spg11Q3UHA3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.15■□□□□ 0.34
Spg11Q3UHA3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Spg11Q3UHA3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.15■□□□□ 0.34
Spg11Q3UHA3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Spg11Q3UHA3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.15■□□□□ 0.34
Spg11Q3UHA3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Spg11Q3UHA3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Spg11Q3UHA3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Spg11Q3UHA3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Spg11Q3UHA3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Spg11Q3UHA3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.15■□□□□ 0.34
Spg11Q3UHA3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Spg11Q3UHA3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Spg11Q3UHA3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Spg11Q3UHA3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.14■□□□□ 0.33
Spg11Q3UHA3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Spg11Q3UHA3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Spg11Q3UHA3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Spg11Q3UHA3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Spg11Q3UHA3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms