Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc28Q3TX51 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lrrc28Q3TX51 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc28Q3TX51 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc28Q3TX51 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc28Q3TX51 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 Gm44549-201ENSMUST00000208351 577 ntBASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc28Q3TX51 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Gm27275-201ENSMUST00000184318 272 ntBASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Gm2559-201ENSMUST00000201323 363 ntBASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc28Q3TX51 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc28Q3TX51 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc28Q3TX51 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc28Q3TX51 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc28Q3TX51 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc28Q3TX51 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc28Q3TX51 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc28Q3TX51 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Lrrc28Q3TX51 Dio3-201ENSMUST00000097228 1449 ntBASIC17.52■□□□□ 0.4
Lrrc28Q3TX51 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Lrrc28Q3TX51 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lrrc28Q3TX51 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lrrc28Q3TX51 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrrc28Q3TX51 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrrc28Q3TX51 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrrc28Q3TX51 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lrrc28Q3TX51 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrrc28Q3TX51 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Lrrc28Q3TX51 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrrc28Q3TX51 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrrc28Q3TX51 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrrc28Q3TX51 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lrrc28Q3TX51 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrrc28Q3TX51 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Lrrc28Q3TX51 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrrc28Q3TX51 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrrc28Q3TX51 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.49■□□□□ 0.39
Lrrc28Q3TX51 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.49■□□□□ 0.39
Lrrc28Q3TX51 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lrrc28Q3TX51 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
Lrrc28Q3TX51 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lrrc28Q3TX51 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrrc28Q3TX51 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms