Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Treml4Q3LRV9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Treml4Q3LRV9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Treml4Q3LRV9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Treml4Q3LRV9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Treml4Q3LRV9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Treml4Q3LRV9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Treml4Q3LRV9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Treml4Q3LRV9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Treml4Q3LRV9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Treml4Q3LRV9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Treml4Q3LRV9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Treml4Q3LRV9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Treml4Q3LRV9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.34■□□□□ 0.37
Treml4Q3LRV9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Treml4Q3LRV9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Treml4Q3LRV9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Treml4Q3LRV9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Treml4Q3LRV9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.34■□□□□ 0.37
Treml4Q3LRV9 Gm44549-201ENSMUST00000208351 577 ntBASIC17.34■□□□□ 0.37
Treml4Q3LRV9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Treml4Q3LRV9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Treml4Q3LRV9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Treml4Q3LRV9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Treml4Q3LRV9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Treml4Q3LRV9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Treml4Q3LRV9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Treml4Q3LRV9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Treml4Q3LRV9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Treml4Q3LRV9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Treml4Q3LRV9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Treml4Q3LRV9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Gm11643-201ENSMUST00000119578 864 ntBASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Treml4Q3LRV9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml4Q3LRV9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms