Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Gm2756-201ENSMUST00000195851 400 ntBASIC16.73■□□□□ 0.27
Chd8Q09XV5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd8Q09XV5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd8Q09XV5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd8Q09XV5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd8Q09XV5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd8Q09XV5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd8Q09XV5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd8Q09XV5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd8Q09XV5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd8Q09XV5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd8Q09XV5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Chd8Q09XV5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chd8Q09XV5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.72■□□□□ 0.27
Chd8Q09XV5 Gm27742-201ENSMUST00000184667 60 ntBASIC16.72■□□□□ 0.27
Chd8Q09XV5 Gm2651-201ENSMUST00000203560 838 ntBASIC16.72■□□□□ 0.27
Chd8Q09XV5 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.72■□□□□ 0.27
Chd8Q09XV5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd8Q09XV5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chd8Q09XV5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chd8Q09XV5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.71■□□□□ 0.27
Chd8Q09XV5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd8Q09XV5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd8Q09XV5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd8Q09XV5 Gm23935-201ENSMUST00000102303 57 ntBASIC16.71■□□□□ 0.27
Chd8Q09XV5 Gm24270-201ENSMUST00000102326 57 ntBASIC16.71■□□□□ 0.27
Chd8Q09XV5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chd8Q09XV5 Gm24245-201ENSMUST00000157318 57 ntBASIC16.71■□□□□ 0.27
Chd8Q09XV5 Gm10138-203ENSMUST00000206952 366 ntBASIC16.71■□□□□ 0.27
Chd8Q09XV5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd8Q09XV5 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.71■□□□□ 0.27
Chd8Q09XV5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd8Q09XV5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chd8Q09XV5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chd8Q09XV5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chd8Q09XV5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd8Q09XV5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd8Q09XV5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Chd8Q09XV5 Gm13884-201ENSMUST00000118103 829 ntBASIC16.7■□□□□ 0.26
Chd8Q09XV5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd8Q09XV5 Gm27357-201ENSMUST00000183754 135 ntBASIC16.7■□□□□ 0.26
Chd8Q09XV5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.7■□□□□ 0.26
Chd8Q09XV5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd8Q09XV5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd8Q09XV5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.7■□□□□ 0.26
Chd8Q09XV5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.7■□□□□ 0.26
Chd8Q09XV5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.7■□□□□ 0.26
Chd8Q09XV5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd8Q09XV5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Chd8Q09XV5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.7■□□□□ 0.26
Chd8Q09XV5 Gm2213-201ENSMUST00000197485 688 ntBASIC16.7■□□□□ 0.26
Chd8Q09XV5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.7■□□□□ 0.26
Chd8Q09XV5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd8Q09XV5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd8Q09XV5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chd8Q09XV5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chd8Q09XV5 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.69■□□□□ 0.26
Chd8Q09XV5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd8Q09XV5 Gm11927-201ENSMUST00000118472 759 ntBASIC16.69■□□□□ 0.26
Chd8Q09XV5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Chd8Q09XV5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd8Q09XV5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd8Q09XV5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd8Q09XV5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd8Q09XV5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Chd8Q09XV5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd8Q09XV5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.68■□□□□ 0.26
Chd8Q09XV5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd8Q09XV5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Chd8Q09XV5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.67■□□□□ 0.26
Chd8Q09XV5 Gm15165-201ENSMUST00000118140 502 ntBASIC16.67■□□□□ 0.26
Chd8Q09XV5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.67■□□□□ 0.26
Chd8Q09XV5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Chd8Q09XV5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd8Q09XV5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.67■□□□□ 0.26
Chd8Q09XV5 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.67■□□□□ 0.26
Chd8Q09XV5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd8Q09XV5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd8Q09XV5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Chd8Q09XV5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Chd8Q09XV5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.67■□□□□ 0.26
Chd8Q09XV5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd8Q09XV5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.67■□□□□ 0.26
Chd8Q09XV5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd8Q09XV5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms