Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf1Q07802 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf1Q07802 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf1Q07802 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf1Q07802 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ebf1Q07802 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.72■□□□□ 0.59
Ebf1Q07802 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf1Q07802 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf1Q07802 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf1Q07802 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Ebf1Q07802 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf1Q07802 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf1Q07802 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf1Q07802 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf1Q07802 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf1Q07802 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf1Q07802 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf1Q07802 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.71■□□□□ 0.59
Ebf1Q07802 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.71■□□□□ 0.59
Ebf1Q07802 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf1Q07802 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ebf1Q07802 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf1Q07802 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf1Q07802 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf1Q07802 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf1Q07802 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf1Q07802 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf1Q07802 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.7■□□□□ 0.58
Ebf1Q07802 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf1Q07802 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf1Q07802 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf1Q07802 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.7■□□□□ 0.58
Ebf1Q07802 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ebf1Q07802 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 Gm13836-201ENSMUST00000121159 501 ntBASIC18.69■□□□□ 0.58
Ebf1Q07802 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.69■□□□□ 0.58
Ebf1Q07802 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Ebf1Q07802 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.69■□□□□ 0.58
Ebf1Q07802 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf1Q07802 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf1Q07802 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf1Q07802 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ebf1Q07802 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.68■□□□□ 0.58
Ebf1Q07802 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf1Q07802 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf1Q07802 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf1Q07802 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf1Q07802 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf1Q07802 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf1Q07802 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf1Q07802 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ebf1Q07802 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ebf1Q07802 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf1Q07802 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf1Q07802 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf1Q07802 Gm18666-201ENSMUST00000190039 958 ntBASIC18.67■□□□□ 0.58
Ebf1Q07802 Gm44549-201ENSMUST00000208351 577 ntBASIC18.67■□□□□ 0.58
Ebf1Q07802 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.67■□□□□ 0.58
Ebf1Q07802 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf1Q07802 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf1Q07802 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf1Q07802 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf1Q07802 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf1Q07802 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf1Q07802 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf1Q07802 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ebf1Q07802 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf1Q07802 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf1Q07802 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ebf1Q07802 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf1Q07802 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ebf1Q07802 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ebf1Q07802 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf1Q07802 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf1Q07802 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf1Q07802 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.66■□□□□ 0.58
Ebf1Q07802 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.65■□□□□ 0.58
Ebf1Q07802 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf1Q07802 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf1Q07802 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf1Q07802 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf1Q07802 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf1Q07802 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf1Q07802 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ebf1Q07802 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.65■□□□□ 0.58
Ebf1Q07802 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms