Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six5P70178 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six5P70178 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six5P70178 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six5P70178 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six5P70178 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Six5P70178 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six5P70178 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Six5P70178 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.33■□□□□ 0.37
Six5P70178 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Six5P70178 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Six5P70178 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six5P70178 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Six5P70178 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.33■□□□□ 0.36
Six5P70178 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Six5P70178 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six5P70178 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six5P70178 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.33■□□□□ 0.36
Six5P70178 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.33■□□□□ 0.36
Six5P70178 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six5P70178 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.33■□□□□ 0.36
Six5P70178 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six5P70178 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six5P70178 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six5P70178 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Six5P70178 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six5P70178 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Six5P70178 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six5P70178 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six5P70178 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Six5P70178 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six5P70178 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six5P70178 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six5P70178 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six5P70178 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Six5P70178 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six5P70178 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six5P70178 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.32■□□□□ 0.36
Six5P70178 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Six5P70178 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six5P70178 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.32■□□□□ 0.36
Six5P70178 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.32■□□□□ 0.36
Six5P70178 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Six5P70178 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.32■□□□□ 0.36
Six5P70178 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six5P70178 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Six5P70178 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.32■□□□□ 0.36
Six5P70178 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.31■□□□□ 0.36
Six5P70178 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.31■□□□□ 0.36
Six5P70178 Gm27405-201ENSMUST00000184201 112 ntBASIC17.31■□□□□ 0.36
Six5P70178 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.31■□□□□ 0.36
Six5P70178 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Six5P70178 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Six5P70178 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Six5P70178 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Six5P70178 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.31■□□□□ 0.36
Six5P70178 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six5P70178 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six5P70178 Nespas-201ENSMUST00000143738 1083 ntBASIC17.3■□□□□ 0.36
Six5P70178 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Six5P70178 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six5P70178 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six5P70178 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six5P70178 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Six5P70178 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.29■□□□□ 0.36
Six5P70178 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.29■□□□□ 0.36
Six5P70178 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.29■□□□□ 0.36
Six5P70178 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Six5P70178 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.29■□□□□ 0.36
Six5P70178 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.28■□□□□ 0.36
Six5P70178 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Six5P70178 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms