Protein–RNA interactions for Protein: P59438

Hps5, Hermansky-Pudlak syndrome 5 protein homolog, mousemouse

Predictions only

Length 1,126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps5P59438 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.76■□□□□ 0.91
Hps5P59438 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps5P59438 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps5P59438 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Hps5P59438 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hps5P59438 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps5P59438 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps5P59438 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps5P59438 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps5P59438 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Hps5P59438 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps5P59438 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps5P59438 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hps5P59438 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Hps5P59438 Gm27275-201ENSMUST00000184318 272 ntBASIC20.75■□□□□ 0.91
Hps5P59438 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.75■□□□□ 0.91
Hps5P59438 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.75■□□□□ 0.91
Hps5P59438 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps5P59438 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps5P59438 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hps5P59438 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Hps5P59438 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hps5P59438 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hps5P59438 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Hps5P59438 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hps5P59438 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Hps5P59438 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hps5P59438 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hps5P59438 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hps5P59438 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Hps5P59438 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hps5P59438 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Hps5P59438 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hps5P59438 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Hps5P59438 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hps5P59438 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hps5P59438 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hps5P59438 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hps5P59438 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hps5P59438 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.73■□□□□ 0.91
Hps5P59438 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.73■□□□□ 0.91
Hps5P59438 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.73■□□□□ 0.91
Hps5P59438 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hps5P59438 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hps5P59438 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Hps5P59438 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hps5P59438 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hps5P59438 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hps5P59438 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Hps5P59438 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.73■□□□□ 0.91
Hps5P59438 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hps5P59438 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hps5P59438 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hps5P59438 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hps5P59438 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hps5P59438 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hps5P59438 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hps5P59438 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hps5P59438 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Hps5P59438 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hps5P59438 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hps5P59438 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.72■□□□□ 0.91
Hps5P59438 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hps5P59438 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Hps5P59438 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hps5P59438 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hps5P59438 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hps5P59438 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hps5P59438 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hps5P59438 Gm26524-201ENSMUST00000192339 390 ntBASIC20.71■□□□□ 0.91
Hps5P59438 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.71■□□□□ 0.91
Hps5P59438 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.71■□□□□ 0.91
Hps5P59438 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hps5P59438 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Hps5P59438 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Hps5P59438 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hps5P59438 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hps5P59438 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hps5P59438 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hps5P59438 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.71■□□□□ 0.91
Hps5P59438 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.7■□□□□ 0.9
Hps5P59438 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.7■□□□□ 0.9
Hps5P59438 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.7■□□□□ 0.9
Hps5P59438 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hps5P59438 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hps5P59438 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Hps5P59438 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Hps5P59438 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hps5P59438 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.69■□□□□ 0.9
Hps5P59438 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hps5P59438 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hps5P59438 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hps5P59438 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Hps5P59438 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Hps5P59438 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hps5P59438 Gm5643-201ENSMUST00000117081 966 ntBASIC20.69■□□□□ 0.9
Hps5P59438 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Hps5P59438 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hps5P59438 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.69■□□□□ 0.9
Hps5P59438 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms