Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox1P53783 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox1P53783 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sox1P53783 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox1P53783 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox1P53783 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sox1P53783 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19■□□□□ 0.63
Sox1P53783 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sox1P53783 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox1P53783 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sox1P53783 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox1P53783 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox1P53783 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox1P53783 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox1P53783 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Sox1P53783 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox1P53783 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sox1P53783 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19■□□□□ 0.63
Sox1P53783 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox1P53783 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.99■□□□□ 0.63
Sox1P53783 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox1P53783 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox1P53783 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox1P53783 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox1P53783 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Sox1P53783 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox1P53783 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox1P53783 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox1P53783 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.98■□□□□ 0.63
Sox1P53783 Gm25016-201ENSMUST00000158399 131 ntBASIC18.98■□□□□ 0.63
Sox1P53783 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.98■□□□□ 0.63
Sox1P53783 Gm22697-201ENSMUST00000175194 63 ntBASIC18.98■□□□□ 0.63
Sox1P53783 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox1P53783 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox1P53783 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Sox1P53783 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.98■□□□□ 0.63
Sox1P53783 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox1P53783 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.97■□□□□ 0.63
Sox1P53783 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sox1P53783 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox1P53783 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.97■□□□□ 0.63
Sox1P53783 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox1P53783 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Sox1P53783 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.97■□□□□ 0.63
Sox1P53783 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox1P53783 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.97■□□□□ 0.63
Sox1P53783 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox1P53783 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox1P53783 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox1P53783 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox1P53783 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox1P53783 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox1P53783 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox1P53783 AW822252-206ENSMUST00000208904 237 ntBASIC18.96■□□□□ 0.63
Sox1P53783 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox1P53783 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sox1P53783 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox1P53783 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.96■□□□□ 0.63
Sox1P53783 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox1P53783 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox1P53783 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox1P53783 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sox1P53783 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox1P53783 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox1P53783 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox1P53783 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox1P53783 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Sox1P53783 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox1P53783 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox1P53783 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox1P53783 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox1P53783 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox1P53783 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox1P53783 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox1P53783 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox1P53783 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox1P53783 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Sox1P53783 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox1P53783 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox1P53783 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox1P53783 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.94■□□□□ 0.62
Sox1P53783 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.94■□□□□ 0.62
Sox1P53783 Gm10138-203ENSMUST00000206952 366 ntBASIC18.94■□□□□ 0.62
Sox1P53783 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox1P53783 Gm18669-201ENSMUST00000216049 778 ntBASIC18.94■□□□□ 0.62
Sox1P53783 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox1P53783 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.94■□□□□ 0.62
Sox1P53783 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Sox1P53783 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.94■□□□□ 0.62
Sox1P53783 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox1P53783 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sox1P53783 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.94■□□□□ 0.62
Sox1P53783 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox1P53783 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox1P53783 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sox1P53783 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox1P53783 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.93■□□□□ 0.62
Sox1P53783 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sox1P53783 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sox1P53783 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms