Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdx1P52946 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.37■□□□□ 0.53
Pdx1P52946 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.37■□□□□ 0.53
Pdx1P52946 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pdx1P52946 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdx1P52946 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdx1P52946 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdx1P52946 Gm37179-201ENSMUST00000194862 823 ntBASIC18.36■□□□□ 0.53
Pdx1P52946 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pdx1P52946 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pdx1P52946 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.36■□□□□ 0.53
Pdx1P52946 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdx1P52946 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdx1P52946 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdx1P52946 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdx1P52946 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdx1P52946 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pdx1P52946 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pdx1P52946 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdx1P52946 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pdx1P52946 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdx1P52946 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdx1P52946 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.35■□□□□ 0.53
Pdx1P52946 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdx1P52946 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.35■□□□□ 0.53
Pdx1P52946 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.35■□□□□ 0.53
Pdx1P52946 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.35■□□□□ 0.53
Pdx1P52946 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdx1P52946 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pdx1P52946 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pdx1P52946 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdx1P52946 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdx1P52946 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdx1P52946 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.34■□□□□ 0.53
Pdx1P52946 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pdx1P52946 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdx1P52946 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.33■□□□□ 0.52
Pdx1P52946 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.33■□□□□ 0.52
Pdx1P52946 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.33■□□□□ 0.52
Pdx1P52946 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Pdx1P52946 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.33■□□□□ 0.52
Pdx1P52946 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.33■□□□□ 0.52
Pdx1P52946 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdx1P52946 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdx1P52946 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdx1P52946 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdx1P52946 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdx1P52946 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdx1P52946 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdx1P52946 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdx1P52946 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pdx1P52946 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdx1P52946 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdx1P52946 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdx1P52946 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdx1P52946 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdx1P52946 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdx1P52946 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdx1P52946 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.32■□□□□ 0.52
Pdx1P52946 Gm6365-201ENSMUST00000054711 744 ntBASIC18.32■□□□□ 0.52
Pdx1P52946 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.32■□□□□ 0.52
Pdx1P52946 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdx1P52946 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdx1P52946 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdx1P52946 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdx1P52946 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pdx1P52946 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdx1P52946 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.31■□□□□ 0.52
Pdx1P52946 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pdx1P52946 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdx1P52946 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Pdx1P52946 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pdx1P52946 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdx1P52946 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Pdx1P52946 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdx1P52946 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdx1P52946 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdx1P52946 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdx1P52946 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdx1P52946 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
Pdx1P52946 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdx1P52946 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pdx1P52946 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdx1P52946 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdx1P52946 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.29■□□□□ 0.52
Pdx1P52946 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdx1P52946 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdx1P52946 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdx1P52946 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdx1P52946 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Pdx1P52946 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.29■□□□□ 0.52
Pdx1P52946 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.29■□□□□ 0.52
Pdx1P52946 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdx1P52946 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdx1P52946 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.29■□□□□ 0.52
Pdx1P52946 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pdx1P52946 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdx1P52946 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pdx1P52946 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pdx1P52946 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms