Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hnf4aP49698 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hnf4aP49698 Gm13146-201ENSMUST00000118508 780 ntBASIC17.97■□□□□ 0.47
Hnf4aP49698 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.97■□□□□ 0.47
Hnf4aP49698 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hnf4aP49698 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Hnf4aP49698 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hnf4aP49698 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hnf4aP49698 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Hnf4aP49698 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hnf4aP49698 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hnf4aP49698 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hnf4aP49698 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
Hnf4aP49698 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hnf4aP49698 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hnf4aP49698 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hnf4aP49698 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hnf4aP49698 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.96■□□□□ 0.47
Hnf4aP49698 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hnf4aP49698 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hnf4aP49698 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hnf4aP49698 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Hnf4aP49698 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Hnf4aP49698 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hnf4aP49698 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.96■□□□□ 0.47
Hnf4aP49698 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hnf4aP49698 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.96■□□□□ 0.46
Hnf4aP49698 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hnf4aP49698 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hnf4aP49698 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hnf4aP49698 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hnf4aP49698 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hnf4aP49698 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hnf4aP49698 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hnf4aP49698 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hnf4aP49698 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hnf4aP49698 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hnf4aP49698 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hnf4aP49698 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hnf4aP49698 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hnf4aP49698 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hnf4aP49698 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hnf4aP49698 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hnf4aP49698 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hnf4aP49698 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Hnf4aP49698 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hnf4aP49698 Gm10493-201ENSMUST00000097270 612 ntBASIC17.94■□□□□ 0.46
Hnf4aP49698 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hnf4aP49698 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hnf4aP49698 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hnf4aP49698 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Hnf4aP49698 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hnf4aP49698 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.94■□□□□ 0.46
Hnf4aP49698 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hnf4aP49698 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hnf4aP49698 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hnf4aP49698 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.93■□□□□ 0.46
Hnf4aP49698 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.93■□□□□ 0.46
Hnf4aP49698 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hnf4aP49698 Gm13234-201ENSMUST00000120010 747 ntBASIC17.93■□□□□ 0.46
Hnf4aP49698 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hnf4aP49698 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hnf4aP49698 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hnf4aP49698 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hnf4aP49698 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hnf4aP49698 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hnf4aP49698 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hnf4aP49698 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.92■□□□□ 0.46
Hnf4aP49698 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.92■□□□□ 0.46
Hnf4aP49698 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Hnf4aP49698 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hnf4aP49698 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hnf4aP49698 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hnf4aP49698 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hnf4aP49698 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hnf4aP49698 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hnf4aP49698 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hnf4aP49698 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hnf4aP49698 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hnf4aP49698 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hnf4aP49698 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hnf4aP49698 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hnf4aP49698 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.91■□□□□ 0.46
Hnf4aP49698 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.91■□□□□ 0.46
Hnf4aP49698 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.91■□□□□ 0.46
Hnf4aP49698 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hnf4aP49698 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Hnf4aP49698 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.91■□□□□ 0.46
Hnf4aP49698 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hnf4aP49698 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hnf4aP49698 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hnf4aP49698 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hnf4aP49698 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.91■□□□□ 0.46
Hnf4aP49698 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hnf4aP49698 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hnf4aP49698 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hnf4aP49698 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hnf4aP49698 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.9■□□□□ 0.46
Hnf4aP49698 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hnf4aP49698 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms