Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.61■□□□□ 0.57
Fen1P39749 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Fen1P39749 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fen1P39749 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fen1P39749 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Fen1P39749 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Fen1P39749 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fen1P39749 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fen1P39749 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.6■□□□□ 0.57
Fen1P39749 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Fen1P39749 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fen1P39749 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.6■□□□□ 0.57
Fen1P39749 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Fen1P39749 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fen1P39749 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fen1P39749 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fen1P39749 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fen1P39749 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fen1P39749 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Fen1P39749 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fen1P39749 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fen1P39749 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.59■□□□□ 0.57
Fen1P39749 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fen1P39749 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Fen1P39749 Gm12922-201ENSMUST00000120626 809 ntBASIC18.59■□□□□ 0.57
Fen1P39749 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.59■□□□□ 0.57
Fen1P39749 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Fen1P39749 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.59■□□□□ 0.57
Fen1P39749 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fen1P39749 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fen1P39749 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fen1P39749 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fen1P39749 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fen1P39749 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fen1P39749 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fen1P39749 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fen1P39749 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fen1P39749 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fen1P39749 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fen1P39749 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Fen1P39749 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fen1P39749 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fen1P39749 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fen1P39749 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Fen1P39749 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.58■□□□□ 0.56
Fen1P39749 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fen1P39749 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fen1P39749 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Fen1P39749 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fen1P39749 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.58■□□□□ 0.56
Fen1P39749 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.57■□□□□ 0.56
Fen1P39749 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fen1P39749 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Fen1P39749 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Fen1P39749 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fen1P39749 Gm21956-201ENSMUST00000179946 522 ntBASIC18.57■□□□□ 0.56
Fen1P39749 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fen1P39749 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fen1P39749 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Fen1P39749 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fen1P39749 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fen1P39749 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Fen1P39749 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.57■□□□□ 0.56
Fen1P39749 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fen1P39749 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fen1P39749 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Fen1P39749 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.56■□□□□ 0.56
Fen1P39749 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fen1P39749 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Fen1P39749 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Fen1P39749 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Fen1P39749 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fen1P39749 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Fen1P39749 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Fen1P39749 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fen1P39749 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Fen1P39749 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.55■□□□□ 0.56
Fen1P39749 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fen1P39749 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.55■□□□□ 0.56
Fen1P39749 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fen1P39749 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.55■□□□□ 0.56
Fen1P39749 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fen1P39749 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fen1P39749 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Fen1P39749 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.55■□□□□ 0.56
Fen1P39749 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.55■□□□□ 0.56
Fen1P39749 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.55■□□□□ 0.56
Fen1P39749 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.55■□□□□ 0.56
Fen1P39749 Golgb1-201ENSMUST00000023534 498 ntBASIC18.55■□□□□ 0.56
Fen1P39749 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fen1P39749 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Fen1P39749 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Fen1P39749 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
Fen1P39749 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fen1P39749 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fen1P39749 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fen1P39749 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Fen1P39749 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.54■□□□□ 0.56
Fen1P39749 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.54■□□□□ 0.56
Fen1P39749 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms