Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ApoeP08226 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ApoeP08226 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ApoeP08226 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ApoeP08226 Gm7860-201ENSMUST00000121190 879 ntBASIC17.5■□□□□ 0.39
ApoeP08226 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ApoeP08226 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ApoeP08226 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ApoeP08226 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ApoeP08226 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ApoeP08226 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ApoeP08226 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ApoeP08226 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ApoeP08226 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ApoeP08226 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ApoeP08226 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
ApoeP08226 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ApoeP08226 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ApoeP08226 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.49■□□□□ 0.39
ApoeP08226 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ApoeP08226 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ApoeP08226 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ApoeP08226 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ApoeP08226 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ApoeP08226 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ApoeP08226 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.49■□□□□ 0.39
ApoeP08226 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ApoeP08226 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ApoeP08226 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ApoeP08226 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ApoeP08226 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ApoeP08226 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ApoeP08226 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ApoeP08226 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ApoeP08226 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ApoeP08226 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ApoeP08226 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ApoeP08226 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.48■□□□□ 0.39
ApoeP08226 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ApoeP08226 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.47■□□□□ 0.39
ApoeP08226 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ApoeP08226 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ApoeP08226 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ApoeP08226 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.47■□□□□ 0.39
ApoeP08226 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ApoeP08226 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.47■□□□□ 0.39
ApoeP08226 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ApoeP08226 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.47■□□□□ 0.39
ApoeP08226 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ApoeP08226 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ApoeP08226 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ApoeP08226 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ApoeP08226 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ApoeP08226 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ApoeP08226 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ApoeP08226 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ApoeP08226 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ApoeP08226 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ApoeP08226 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ApoeP08226 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ApoeP08226 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ApoeP08226 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
ApoeP08226 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ApoeP08226 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
ApoeP08226 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
ApoeP08226 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ApoeP08226 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.46■□□□□ 0.39
ApoeP08226 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ApoeP08226 Spcs1-204ENSMUST00000226782 949 ntBASIC17.46■□□□□ 0.39
ApoeP08226 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ApoeP08226 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.46■□□□□ 0.39
ApoeP08226 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ApoeP08226 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ApoeP08226 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ApoeP08226 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ApoeP08226 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ApoeP08226 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ApoeP08226 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ApoeP08226 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ApoeP08226 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ApoeP08226 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ApoeP08226 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ApoeP08226 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ApoeP08226 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ApoeP08226 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
ApoeP08226 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.45■□□□□ 0.38
ApoeP08226 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ApoeP08226 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ApoeP08226 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ApoeP08226 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ApoeP08226 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ApoeP08226 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ApoeP08226 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ApoeP08226 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ApoeP08226 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ApoeP08226 Gm12922-201ENSMUST00000120626 809 ntBASIC17.44■□□□□ 0.38
ApoeP08226 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.44■□□□□ 0.38
ApoeP08226 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.44■□□□□ 0.38
ApoeP08226 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.44■□□□□ 0.38
ApoeP08226 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms