Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P06336 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P06336 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P06336 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.11■□□□□ 0.33
P06336 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.1■□□□□ 0.33
P06336 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P06336 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
P06336 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P06336 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P06336 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
P06336 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P06336 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P06336 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P06336 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P06336 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06336 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.09■□□□□ 0.33
P06336 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06336 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06336 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06336 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06336 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06336 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.09■□□□□ 0.33
P06336 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P06336 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06336 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
P06336 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P06336 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
P06336 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
P06336 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06336 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.09■□□□□ 0.33
P06336 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06336 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.08■□□□□ 0.33
P06336 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
P06336 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P06336 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
P06336 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P06336 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P06336 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P06336 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P06336 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
P06336 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06336 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
P06336 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.07■□□□□ 0.32
P06336 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P06336 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
P06336 Gm7290-201ENSMUST00000104990 617 ntBASIC17.07■□□□□ 0.32
P06336 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P06336 Gm12918-201ENSMUST00000120234 636 ntBASIC17.07■□□□□ 0.32
P06336 Gm15710-201ENSMUST00000121821 636 ntBASIC17.07■□□□□ 0.32
P06336 Gm5075-201ENSMUST00000196916 622 ntBASIC17.07■□□□□ 0.32
P06336 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.07■□□□□ 0.32
P06336 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06336 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.07■□□□□ 0.32
P06336 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.07■□□□□ 0.32
P06336 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P06336 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.07■□□□□ 0.32
P06336 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.07■□□□□ 0.32
P06336 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06336 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.07■□□□□ 0.32
P06336 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
P06336 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.06■□□□□ 0.32
P06336 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.06■□□□□ 0.32
P06336 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
P06336 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.06■□□□□ 0.32
P06336 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P06336 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
P06336 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P06336 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P06336 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P06336 Gm12933-201ENSMUST00000120203 872 ntBASIC17.05■□□□□ 0.32
P06336 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.05■□□□□ 0.32
P06336 Mir5133-201ENSMUST00000174955 77 ntBASIC17.05■□□□□ 0.32
P06336 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.05■□□□□ 0.32
P06336 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.05■□□□□ 0.32
P06336 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P06336 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P06336 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P06336 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
P06336 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
P06336 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
P06336 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P06336 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.04■□□□□ 0.32
P06336 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms